Cajanus cajan (pigeon pea): 109805187
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Entry
109805187 CDS
T04868
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccaj04812
]
109805187
Cytoskeleton proteins [BR:
ccaj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109805187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
eIF2A
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109805187
NCBI-ProteinID:
XP_020222778
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Position
9:complement(7887993..7898465)
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AA seq
811 aa
AA seq
DB search
MAKSGYKLQEFAAHSGNVNCLKIGRKARRLFVTGGDDHNVNLWMIGKPTSLMSLCGHTSS
VESVAFDSAEVLVLSGASSGVIKLWDLEEAKMVRTLNGHRSNCTAVEFHPFGELFVSGSS
DANLKIWDIRKKGCIHTYKGHSQGISTIKFSPDGRWVVSGGFDNSVKVWDLTGGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSAYRTVKFWDLETFELIGSTRYEVAGVRSIAFHPDGRT
LFAGLEDSLKVYSWEPVICHDAVDMEWITLGDLCIHDGKLLGCSFYSNSVGVWVSDISLI
EPYSGSLESERKESSEQKLSLQGRQMEKVEAGVGPTFGLCSMSPDNESKEIKNIYIDSSG
GSPDTLPRSRSYNSPKVDLPEDSKEMLNWSPATGVRAKSNEQALKKSHIASNLPGGILNG
KESATFSNSKPGMLLKQSHVQGVSTNTFDVDEFSSDLDSGTFCDTISKSDRANFQMKHGP
QNEVRESIEDEHAIKSVTEKLEKTLTPDRFSEQEKCNQSFPYSKESSPVKYINGAVAVLP
GRTRSLVERFERREKTPTNEDQANATPITIFANRGNFVKEDQTKTSPITTMTSEKEERIP
FSEDQNNMSTVPNTTSETDKSTNFLKVELQDFGGDSNSANEGEIIEGLMQTHDVTLSNLR
SRLTKLQVVRHFWERNDSKGAVGALRKLPDQSVQADVVSVLVEKTEILTLDLFSCLLPVL
VGLLDSKIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSIGVDLHAEQRRECSNQCFMQL
QKIRMILPIIIRRGGLLAKSAQELNLVLQQP
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcaggatacaaactacaggaatttgcagcccattcagggaatgtaaactgt
ttaaaaattggaaggaaggctagacgccttttcgttacaggaggggatgatcacaatgtc
aatctatggatgattgggaaaccaacttctttaatgagtttatgtggtcacactagttca
gtagaatctgtggcttttgactcagcagaagtattggttctttctggagcatcatcaggg
gtaataaagctttgggatttggaagaagcaaagatggttcgcactcttaatggacacaga
tctaattgcactgctgttgagtttcatccatttggtgaactttttgtatctggctcttcg
gacgctaatctaaagatttgggatatccgaaaaaaaggatgcattcatacatacaagggt
catagccagggcatcagtactatcaaattcagtccagatggtcgttgggttgtttctggt
ggatttgataatagtgtgaaggtctgggatctaacaggaggaaagctcttgcatgacttc
aagttccatgaaggacacattaggtccatagatttccatcctcttgagtttcttctggct
acaggttcagcatacagaacagtgaaattttgggatttagaaacctttgaactgattgga
tctaccagatatgaggttgcaggagtacgctcaatagcttttcatcctgatggacggacc
ctatttgctggacttgaggatagtttaaaggtgtattcatgggaacctgttatatgtcat
gatgctgttgacatggaatggataacgcttggtgacctatgtattcatgatgggaagctt
ttgggttgctcattctacagtaattctgttggagtatgggtgtcagatatttcgcttatt
gagccatatagtggcagtttggaatccgaaagaaaagaaagctcagagcagaaacttagt
ctccagggaagacaaatggagaaagtagaagctggtgtgggaccaacttttgggttgtgc
agtatgtctcctgacaatgagtcaaaagagataaagaatatatatatagactcttctgga
gggagtcctgataccttaccgagatccaggtcttataattctccaaaagtagatcttcct
gaggattccaaagagatgctaaactggagtcctgcaacaggagttcgtgcaaaatcaaat
gaacaagcacttaaaaagtcacacattgcatcaaacttacccgggggcattctcaatgga
aaggagtcagcaaccttttcgaattcaaaacctgggatgttgcttaagcaatctcatgtt
cagggagtatccacaaacacatttgatgttgatgagttttcatcagatttggattctgga
acattttgtgatactataagcaaatccgaccgggcaaactttcaaatgaagcatggaccc
cagaatgaagtgagagaatctattgaggatgaacatgctatcaagagtgtcacagagaag
cttgagaaaactttaacaccagacagattttctgaacaagagaaatgtaatcaatcattt
ccttacagcaaagagagtagtccagttaaatatatcaatggagcagttgctgttttacca
ggaaggacccgttcattggttgagaggtttgaaagaagggaaaaaactcccaccaatgag
gatcaagctaatgcaacccccatcacaatatttgcaaataggggaaattttgtcaaagaa
gatcagactaagacatcccccatcaccaccatgacatctgagaaagaggaaagaattcct
ttcagtgaagatcaaaacaatatgtctactgttcccaacacaaccagcgaaactgataag
tctaccaacttcctgaaagttgagcttcaagattttggaggggattcaaactccgcaaat
gaaggagaaataattgaaggtctgatgcaaactcatgatgtgacattaagtaatctccgt
tcccgtttgacaaaattacaggttgtacgacatttttgggagcggaatgatagcaaaggt
gccgtcggtgccttgagaaagctgcctgatcaatctgttcaagctgatgttgtcagtgtc
cttgttgagaagaccgagattctcaccttagatttattttcttgcttacttcctgtgctc
gtaggtttgctggatagcaagattgaaagacatgtgaaggtgtcattggatatgctgctg
aagcttgtagcagtttttggtccaacaatacgatcaaccatttcggcacctccctcaatt
ggcgttgatctacatgcagagcaaaggcgagaatgctccaatcagtgctttatgcaactg
cagaagatccggatgattcttccgataataatacggaggggtggcttattggccaagtct
gcccaagagctaaatttagttcttcaacaaccctaa
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