Cajanus cajan (pigeon pea): 109805251
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Entry
109805251 CDS
T04868
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109805251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109805251
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109805251
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109805251
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109805251
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109805251
Messenger RNA biogenesis [BR:
ccaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109805251
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP60 / Chaperonin
109805251
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109805251
Exosome [BR:
ccaj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109805251
Exosomal proteins of other body fluids (saliva and urine)
109805251
Exosomal proteins of breast cancer cells
109805251
Exosomal proteins of colorectal cancer cells
109805251
Exosomal proteins of bladder cancer cells
109805251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
109805251
NCBI-ProteinID:
XP_020222860
LinkDB
All DBs
Position
9:3989897..3994422
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFATSLASKARIARSSTQQIGSRVSWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATILTRAIFTEGCKSVAAGMNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISSINAIVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITEELGLNLEKVDLDMLGSCKKVTISKDD
TVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASSELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQNNTDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKDDKDVPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctttgcaacttcccttgcctccaaagctcgaattgccaggagcagcactcaa
cagattggaagtagggtgagttggagcaggaattatgcggccaaagacattaggtttggc
gtggaggcccgggctttgatgcttaagggtgttgaagagcttgctgatgctgttaaagta
accatgggcccaaaggggcgtaatgtggtgattgagcaaagttttggtgcacctaaagtg
acgaaagatggagtgactgttgctaagagcattgaattcaaggataaagtcaagaatatt
ggtgccagtcttgtaaaacaggttgcaaatgctaccaatgacgtggctggtgatggaacc
acatgtgctacaattcttactcgagcaatatttacggaaggctgcaaatcagttgcagct
ggaatgaatgcaatggacctgagaaggggtataaatatggctgttgatgctgtggtgaca
aacctgaaaagcagagcacggatgattagcacttctgaagaaattgcccaggttgggaca
atatctgctaatggggaaagggaaattggtgagttaattgcgaaagctatggagaaagtt
gggaaagagggtgtaatcactatctcagatggcaagacattgtataatgagttggaagtc
gttgaaggaatgaaactcgacaggggatacatttctccatatttcataacaaaccagaag
aaccagaaatgtgaacttgaggatcctctaattataatccatgaaaagaaaatctcaagc
ataaatgctattgttaaagtattagagttagctttgaagagacaaagacctttattgatt
gttgctgaggatgttgaaagtgatgcccttgcaactctaattctaaataaacttcgtgct
ggaatcaaggtatgtgccatcaaagctcccggttttggtgaaaaccgtaaatctggtctc
caggatcttgctgttctcaccggaggtcaacttattactgaagaacttggtttgaatctt
gaaaaagtggatctggacatgcttggctcttgcaaaaaggtaacaatttctaaagatgac
actgtcatccttgatggagctggtgataagaaatcaattgaggaaagatgcgagcagatt
agatcagcaattgagaatagcacttcagattatgacaaggaaaagttacaggaaagacta
gccaagctttctggaggtgttgcagtacttaagattggaggtgctagtgaggctgaagtt
ggtgagaagaaggatagagtgacagatgccttaaatgcaaccaaggcagctgtagaggag
ggcatagtaccaggtggtggtgttgctcttctgtatgcgtcaagtgaattggataagctt
caaactgctaactttgatcaaaagataggtgtccagattatccaaaacgctttaaagact
cctgtgcacacaattgcttcaaatgctggagttgagggtgctgttgttgttggcaaacta
ttggaacagaataatactgatcttgggtatgatgcagccaaaggtgaatatgttgacatg
gtaaaatctggaatcattgatccattgaaggtgattaggaccgccttggttgatgctgcc
agtgtgtcgtctttgatgacaacaaccgaagctgttgtgtctgaactcccaaaggacgat
aaggatgttcctgccatgggtggcggcatgggtggcatggattattaa
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