Cajanus cajan (pigeon pea): 109805340
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Entry
109805340 CDS
T04868
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109805340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccaj04040
]
109805340
Ion channels [BR:
ccaj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109805340
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
109805340
NCBI-ProteinID:
XP_020222969
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Position
9:956700..968310
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AA seq
732 aa
AA seq
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MFDCGYKSQYVGGQREKFVRLDDLDSRLSSSSEAGVKTCGFSIDKLSHGGHGSSTTSRSF
KRRIRKGSEGLKSIGRSLGIGVSWAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILA
VSVDPLFFYLPVINDSLHCLGIDRKLAITVTTLRTFIDAFYLIHMALQFRTAFIAPSSRV
FGRGELVIDPAQIAKRYLQRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKRALMFII
LLQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERND
FCWQKACSGNGYNKNFLYCGNQYMEGYSAWQSRSKDILMSQCSADNDNSPFDFGIFKQAL
SSGIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIG
NMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEDSLV
QSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVD
EMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKAGSNLPSSTRTVKA
LTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKT
MELSRKEEPEESEGTRSNASGNSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQK
PPEPDFTADDAD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtggttacaagtcgcaatatgtgggtgggcagcgggaaaaatttgtgagg
ttggatgacttggattctagactatcatcatcttctgaagctggagttaaaacatgcgga
tttagtattgataaattaagccatggtggccatggaagcagtacaacttctaggtccttt
aaaagaagaattagaaagggatctgaaggactgaagtcaattggccgatcacttggaatt
ggggtatcttgggcagtgttccctgaagatcttaaagtttcggaaaagaagatatttgac
cctcaagacaaatttttgctcttgtggaataagctttttgttatatcatgcattttggct
gtgtctgttgatccactgtttttttatctccctgtcatcaatgattcattgcactgtctt
ggtatagaccgaaagttggcaattacagttaccaccttgaggacatttattgatgctttc
tatcttatacacatggctctccaatttcgtactgcttttattgctccgtcctctcgagtt
tttggacggggtgagcttgtgatagatccagcacagatagccaaacgatacttacagcgg
tatttcattattgatttcctatcagtgttgcccttaccacagattgtggtttggagattt
ctgcagaggtcaaaaggttcagatgtacttgcaacaaagcgggctcttatgttcattatt
ttgcttcagtacattcctagatttttcaggatggttccgttgacgtctgaacttaagaga
acagcaggcgtctttgctgaaactgcatgggcaggtgctgcgtattatttgctattattc
atgcttgctagtcatatagttgggtctttttggtacttgttagctgttgaacgcaatgac
ttttgctggcaaaaggcttgtagtggcaatgggtataataaaaatttcttgtattgtggt
aaccaatacatggaaggttatagtgcctggcaaagtagaagtaaagatattcttatgtca
cagtgctctgcagataatgataattcaccatttgactttggtattttcaaacaagccttg
tcatctggtattgtttcatctaagaagttcttttccaagtactgttactgtttatggtgg
gggctccagaatttaagtacacttggccaggggcttgaaactagcacctacactggggag
gttatcttttcaatagcactagcaatagctggccttatcctctttgcgcttctgatcggt
aacatgcagacgtatcttcaatctcttacgattagacttgaggaaatgagagtcaaaagg
cgtgattcagaacagtggatgcatcatcgcttgctcccacaagagcttagagagcgtgtg
agacgatatgatcaatacaagtggttggcaacacgtggtgtagatgaagacagtttggtt
cagagtttgccaaaggatcttcgaagagacattaagcgtcacctttgtctggctctagtg
agaagggttccactatttgagagtatggatgagagattgcttgatgccatatgtgagaga
ctgaaaccatgtttatttacagagagtacttacattgtccgcgaaggagatccagttgat
gagatgcttttcatcattcggggtcgcctcgagagtgttactacagatggtgggaggagt
ggattctttaatcgtggctttctaaaagaggctgacttctgtggggaggagcttttgact
tgggcactggatcccaaagctggctctaacctcccatcttcaactcgaacagttaaagct
ttaacagaggttgaagcttttgccttaactgctgaagagttaaagtttgttgccagtcag
tttaggcgtctgcacagtagacaggttcagcacacatttcgcttctactcccaacaatgg
aggacatgggctgcatgctttattcaagcagcatggcgccggtattctaaaaggaaaact
atggagctgagtcgtaaggaagaacctgaggagtcagaaggaactcgtagcaatgccagt
ggcaactcatacagccttggtgccaccttcttggcctcaagattcgctgcaaatgctctt
cgcggtgtgcatcgcaatcgggaagccaagagtgccagggagttagtgaaactacagaaa
cctccagagcctgacttcactgctgatgatgcagactaa
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