Cajanus cajan (pigeon pea): 109805571
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Entry
109805571 CDS
T04868
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109805571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109805571
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
109805571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_like
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Pkinase
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
109805571
NCBI-ProteinID:
XP_020223295
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Position
10:complement(3495335..3503420)
Genome browser
AA seq
1001 aa
AA seq
DB search
MDKELEVGGCVQHQSKDDGHSLNPQFPKTLKPQEYSDLPLGKNVLEAISHVAVREHLHPS
LFSDDAGGMVEELKVKSYNGTNLVIGTSNNPELLHNSQSRWRHNYQLVGDSGMGSDCIIA
RNSLQATSSAWGDILARRSVNDDQGDVMQHLSSDVHKAALKEDEGDAREGIQTKITDKPG
FAEYLIRSTSKGKGIVCKGPSSNALLGYGSKTAKSPHNATVPGSGESDCDGVTLREWLKS
RHHKGSKTEHLSIFRKIVDLVDGFHSQGIAMHNLYPSYIKLSPSNQVMYLGLPDQNQTLY
SVVNSEVLQLENSFNRKRLSEKVISPPKLRSKKHKFNENVRVSGDWSQCPPRTDLYLQIA
NDIKINAVGSQDIQYSEHNIWRLSRIPHISNAGQLQLTSLNERLEDKWYASPEGGCATSS
NIYCLGVLFFELLNHFESEKAHIAAMSDLRCRILPSVFLSEYPTEAGFCLWMLHPEPSSR
PTIREILQSEVINGMQEVYSKELSSSLNQDDAESELLLDFLISLKEKQHMEANKLAEKIR
CLESDIEEVERRHDLRKSLLPSSLQNNSFCQIESASLRKEPSSSETLPPVRTISNANEQR
LMKNRCLLENAYFSMRSKIKLPETDTAMHLDKDILKNRDNWCVAQKDMEQHKTTDTLGAF
FDSLCKYARYSKFKLRGTLRNAGFNNPANVICSMSFDRDEDYFAAAGISRKINIFYFNAL
FNDSVNIHYPVVEMSNRSRLSSVCWNNYIQNYLASTDYDGVVKLWDANTSQGFSRFTEHE
KRAWSVDFSLVCPTKFASGSDDCSVKLWSINEKNSLGTIRNVANVCSVQFSTHSSHLLAF
GSADYSAYCYDLRNLRSPWCVLTGHRKAVSYVKFLDSETLVSASTDNTLKIWNLNKTSPE
GPSTSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYAYYKSLPMPVTSHKFGTIDP
ISGKETDDDNGQFVSSVCWRGKSDMVVAANSSGCIKVLQMV
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaattggaggttggtggatgtgtgcaacatcaaagcaaagatgatggacat
tcactaaaccctcaattccccaaaacattaaaaccccaagaatatagtgaccttccacta
ggtaagaatgtgcttgaagccatcagccatgttgccgtgcgggagcatctgcatccaagt
ctcttttcggatgatgctggtggcatggttgaagaattaaaggtgaaaagttacaacggt
actaacctggttattggtacttccaacaatccagagcttttgcataatagtcagagtcga
tggcggcataattatcagctggttggtgattcaggcatgggaagtgattgcataatagcc
agaaatagtcttcaagctacatctagtgcttggggggatatattggctagaagatcagtc
aatgatgatcagggtgatgtcatgcagcacttgtccagtgatgtgcataaagctgcactt
aaagaggatgaaggtgatgctcgtgaaggaatacaaacaaaaattacagataaaccagga
tttgcagagtaccttattagaagtacatcgaagggaaagggtattgtatgtaaaggtcca
tcttctaatgcattattgggctatggttcaaagactgcaaagtctcctcataatgctaca
gtgccaggatccggtgagtctgactgtgatggtgtgactttgagagaatggttgaaatct
aggcaccacaaagggagcaaaacggagcatttaagcatattcagaaaaattgtggatttg
gtggatggttttcactcccagggaattgcaatgcacaatctttacccttcttatattaaa
ttgtcaccatcaaaccaggttatgtaccttgggttgcctgatcagaatcagaccttatat
agtgttgtaaattctgaagttcttcagctagagaattcttttaatagaaaaaggctgtca
gagaaggtaatttctcctcctaagttgcggtcaaagaaacataaattcaatgaaaatgtt
agagtttctggtgattggagtcaatgccctccaaggaccgacttgtatcttcaaattgcc
aatgatattaaaatcaatgcagtgggatcacaagatatccaatattctgaacataatatt
tggagattgtctcgcatccctcacatatctaatgcaggtcaattgcaattgacttcttta
aatgaaagattggaagataaatggtatgcaagtcctgagggtggttgcgcaacatcatca
aatatctactgtctcggagtccttttctttgagttacttaatcattttgaatcagaaaag
gcacatattgctgcaatgtctgatcttcgctgtaggatccttccttcagttttcctatca
gagtatcctacagaagccggattttgcctttggatgttgcatcctgaaccatcatcacgt
ccaacaataagggagatcctacaatctgaagtgattaatggaatgcaggaggtgtacagt
aaggaattatcatcaagtcttaaccaagatgatgcagaatcagaattgctattggatttc
ctcatctccctaaaagagaagcagcacatggaagccaacaaattggcagaaaaaatcaga
tgcttggaatcagatatagaagaggtggagaggagacatgacttgagaaaatccttgctt
ccctcaagcttgcagaacaactccttttgtcaaatagagagtgcgtctcttcgcaaagaa
ccttcaagttccgaaacattaccaccagtacgtacaatttctaatgcaaatgagcagaga
ttgatgaaaaataggtgcctactagaaaatgcatacttttccatgagatccaaaattaaa
cttcctgaaacagacactgcaatgcacctagataaagatatactgaaaaatcgtgacaac
tggtgcgtagctcaaaaagacatggaacaacataagacgacagatactttaggagctttc
tttgacagtttgtgcaagtatgcacgttatagcaagtttaaattgcggggcacactaaga
aatgctggttttaacaatcctgcaaatgtaatctgctctatgagttttgatagggatgaa
gactattttgctgctgctgggatatcaaggaaaataaacattttttatttcaatgcactt
ttcaatgactctgtcaatatccattatcctgtagttgagatgtcaaacagatcaaggctc
agtagtgtttgctggaataactacatccagaactatcttgcctccacagactatgatggt
gtagtcaagctatgggatgccaatacaagccaagggttttctagattcaccgaacatgaa
aagagggcctggtctgttgatttctctctggtatgccctactaaatttgccagcgggagt
gatgattgttctgtgaagctgtggagtatcaatgagaagaacagtttaggcacaatcagg
aacgttgctaatgtctgtagcgtccagttctctactcattcctctcatttgctggccttt
ggatctgcggattactctgcttattgctatgatcttcgcaatcttagaagcccttggtgt
gtgttgactggccatcgtaaagctgtaagctatgtcaaattcttggactctgaaacactt
gtttcagcatcaacggataatacattgaagatctggaatctcaataaaacctctcctgag
ggtccatctactagtgcctgcagcttaaccctgtcaggccatactaatgagaagaatttt
gtgggtttatcagttgctgatggatatatagcatgtggttcagaaacaaatgaggtttat
gcctactataaatctcttcccatgccagtgacttctcacaagtttggcaccattgatcct
atttctggtaaagagacagatgatgacaatggtcagtttgtttcaagtgtgtgctggaga
gggaaatcggacatggttgttgcagccaattcaagtggatgtataaaagttctacagatg
gtttga
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