Cajanus cajan (pigeon pea): 109805622
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Entry
109805622 CDS
T04868
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
ccaj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109805622
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109805622
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109805622
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109805622
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109805622
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109805622
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109805622
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109805622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
109805622
NCBI-ProteinID:
XP_020223372
LinkDB
All DBs
Position
10:complement(325547..334074)
Genome browser
AA seq
516 aa
AA seq
DB search
MNGGDEVVAAPAGPPHPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGNHLATGDRGG
RVVLFERTDTKDHGGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNVDPSKSMGNGYIASSSNSSNSR
PYLANGGSPDRSYNYPSNDFSFPPGGIPSLKLPMVVSSHETSLVARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCNM
LAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCAAGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAETPGVDA
NGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaggtcgtggcagctccggcgggtccaccgcaccctctggagtgg
aaattctctcaggtcttcggggagcgtacggcaggggaagaggttcaggaagtggacata
atttctgctattgaatttgacaagtctggtaatcatcttgctaccggtgatcggggtggt
cgagtggttctctttgagagaacagatacaaaagatcatggtggatcaagaagggatttg
gagaggatggactattccattagtaggcatcctgagttccgttacaaaacagagtttcag
agtcatgagcctgagtttgactatctcaagagtttggagattgaagagaaaatcaacaaa
atcagatggtgccaaacagctaatggtgccctcttccttctttccacaaacgataaaaca
atcaaattttggaaggttcaagaaaagaaggtcaagaaaatttctgagatgaatgttgac
ccttcaaaatcaatgggaaatggatatattgctagttcaagcaattcaagtaattctagg
ccatatctagcaaatggaggatctccagatagatcatataattatccaagcaatgacttt
tcatttccaccaggaggcataccttcactaaaattacccatggtagtaagtagccatgaa
accagcttagttgctcgatgtcgtagagtgtatgcacatgctcatgattaccacatcaat
tctatttcaaataacagtgatggcgaaactttcatatcagctgatgatttgcgaataaat
ctttggaacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctacgaat
atggaggatctgacagaggttataacatcagcagaatttcaccctacacattgtaatatg
ttggcatatagcagttcaaagggttcaatccgtcttgttgatttgcgacaatcagcatta
tgcgattctcattccaaactatttgaggaacaagaagctccagggtccagatcatttttc
acagagattattgcttctatctcagacataaaatttgggaaggatggaagatacatactt
agtcgtgattacatgactttaaagttgtgggacattaatatggattcaggccctgttgca
actttccaggttcatgagtatttaagacccaagctttgtgatttatatgaaaatgattca
atttttgataagttcgagtgttgtctgagtggagatggattgcgtgtagcaactggttct
tacagcaatctatttcgtgtgtttggttgtgccgctggaagtgctgaggctacaacttta
gaagccagtaaaaatccaatgagacgacaagttccaacaccttcaaggccctctagatca
ctgggaaatagtataacacgtgttgtaagacggggagcagaaacccctggtgtggatgct
aatgggaattcttttgatttcaccacgaagttgctgcacttagcatggcatccaagtgaa
aattcaattgcttgtgctgctgcaaatagcttgtacatgtactatgcgtaa
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integrated database retrieval system
