Cajanus cajan (pigeon pea): 109805778
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Entry
109805778 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X2
KO
K14309
nuclear pore complex protein Nup93
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109805778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109805778
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109805778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
TPR_7
DUF4618
TPR_1
PrmA
TPR_8
Motif
Other DBs
NCBI-GeneID:
109805778
NCBI-ProteinID:
XP_020223570
LinkDB
All DBs
Position
10:complement(14390783..14398726)
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AA seq
858 aa
AA seq
DB search
MANESWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRTEAPSQSIAAT
RLLAREGINAEQLARDLKSFELKTAFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQKDN
LRSFSDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSSVGTLPGQIASVSSTPQV
SSGMPSMEIVPLTGRPIVEKKASVYAEVVKTLNRARESGLPFKPAAAFKGAYENLGIDAS
GGKSVTMRKIWHLVQMLMGEDSTPQRVSKRMSLVIGARRHLEWGHEKHIMDTIQSHPAQA
ALGGGVGNLQRIHAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDEARN
VALSSRASHQFSPLLTEWINTGGMVPEEVAAAASEECERMLRTGDRVGRTAYDKKKLLLY
AIISGSRRHIDRLLRDQPNLFSTIEDFLWFKLSAVRDCSSGPSSIVLSDGLIPYSLDDLQ
IYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAILYLSKEAGDEGYNIDAAHLSIVLAD
HGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRLGDLQMALEYYAQAAAAVGGGQLS
WTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGAGEEGELGRFVTDPNARQQFL
IEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINRCLSEAICSLFRGRLDGESQTAGLIH
SGNEILETYTYYPDVSLQERDHVFEQQTVLRQLESILSIHKLARVGHYVDALREVAKLPF
LPLDPRGPDIAGDVFENLSPHVQACIPDLLKAALTCLDNVTDSDGSLRALRAKIASFIAN
NLKRNWPRDLYERVAQRL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaaagttggaccgatctcctacattcgtcaaccaagcttctcgaacaagct
gctccttctgctcagttccctccccttcagaggaacttggatcaactggaagcgttatcc
aagaagcttaaatccaagaccgtaaggactgaagcaccttcgcaatctattgctgcaaca
aggctccttgctcgagaggggataaatgcagagcagcttgctagggatctgaagtcattt
gaactgaagacagcttttgaggatgtttttcctgttgaggctacaagtgttgaagagtat
ctgcagcaggttcatgaaatggcaatggtctctgctgttcaggaagctcaaaaggataat
ctcaggagtttcagtgattacatgatgaaagttttagaggaggattggcaaaaagaaaag
cgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaacattgctgct
aacagcagtgtgggtaccctcccaggtcagattgcgtctgtgtcttctactccacaagtc
tcatctggtatgcctagcatggagattgttcctctgacaggaagacctattgtggagaaa
aaggcatctgtctatgctgaggtggtgaagactctgaatagagcaagggagtctgggtta
ccatttaaacctgctgcagctttcaagggtgcatatgaaaatttgggcattgatgctagt
ggtggaaaatcagtaacgatgcgaaagatatggcaccttgttcagatgctgatgggtgag
gactcaaccccgcaacgtgtttcaaaaaggatgtcattggttattggtgcaagacgccac
cttgaatggggacatgagaagcacataatggataccatacaaagtcatcctgctcaagct
gctcttggtggtggagttgggaatttgcaaagaatccatgccttccttcggattcggttg
agggattatggagtactggattttgatgctggtgatgctcggcggcagcctcctgttgat
accacatggcagcagatatatttttgcctgaggtctggttattatgatgaagcaagaaat
gtagccctatcttcacgtgcttcgcatcaattttctcctttgctcacagagtggattaat
actggagggatggtgccagaagaggttgcagctgctgcatcagaggaatgcgaaagaatg
ttgagaactggtgaccgggtaggtcgaactgcatatgacaagaaaaagttacttctgtat
gccatcatatcaggttctcgaaggcatattgatcgcctgcttagagatcagccaaatctc
tttagtacaatagaggatttcttgtggttcaaattgtcagctgtgcgggattgttctagt
ggaccttcatccattgttctaagtgatggtctgattccttacagtttggatgatttacaa
atttacctgaataaatttgagccctcatattatacaaagaatggaaaagatcctctggtt
tatccctatatcttgcttttaagcattcaattgcttccagccatattgtacttgtctaag
gaagcgggtgatgaaggatataacattgatgctgcccacctatcaatcgtgctagctgac
catggggtcctttctgaaggtgctggttctgggcaaaagttgggagtgatggatgcttat
gcagaagtgtccaccattatcaggcagtatggatctatgtatttgcgtcttggtgatctc
caaatggcactagaatattacgcacaagctgctgcagcagtgggtggggggcagttgtca
tggactggtaggggtaatgttgatcagcaaaggcagagaaatttgatgctgaagcagctt
ctaactgaattattgttaagggatggaggcatatatcttttacttggtgcaagaggtgct
ggagaagaaggtgaattgggacgttttgtgactgatcccaatgcaagacaacaattttta
attgaagctgcatgtcagtgtcaagaggctgggatgtatgacaagtctatagaaattcag
aagagagtgggttccttctcaatggcactggataccatcaataggtgcctctctgaagct
atttgttcccttttccgtggaagattagatggtgagagtcagactgctggcctcatccat
tctggcaatgaaattttggagacatacacttattacccagatgtcagtcttcaagagaga
gatcacgtttttgagcagcaaactgtgttacgacaactagagtcaatattgtcaattcac
aaattagcaagagtggggcattatgttgatgcattaagggaagttgctaagcttccattt
cttcctctagatccccgaggacctgatattgctggtgacgtgtttgaaaatttatcccct
catgtccaagcttgtattccagatcttttgaaggctgctctcacttgtctggacaatgtg
acagactctgatggatcacttcgtgccttaagggccaagattgcgagttttatcgcaaat
aatttaaagaggaattggcctcgtgatttgtatgagagagttgcgcagaggttgtga
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