Cajanus cajan (pigeon pea): 109805779
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Entry
109805779 CDS
T04868
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109805779
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccaj01002
]
109805779
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109805779
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109805779
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109805779
Peptidases and inhibitors [BR:
ccaj01002
]
Metallo peptidases
Family M67
109805779
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109805779
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109805779
BRISC complex
109805779
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
109805779
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
109805779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
109805779
NCBI-ProteinID:
XP_020223571
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All DBs
Position
10:14362218..14367054
Genome browser
AA seq
436 aa
AA seq
DB search
MSLTSVKMSSEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASALAERMTSATGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQSSISRPVPLSPVNRSSVIDIDSSPSSS
ENVSVRSGYFKADGTEQDTGDSTSVGASKDGGRSDLGNFFANADANYLGRDKSGGNYHLN
NLESNTVDVDPMDMSESMQEAMHRSNLEMSGAEYVRKEIPLHVLPAPSLINLDSPLSSYT
DLQRVLFEEEQNAYNQAISQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQD
RLRENEIRLAFLSEEAKSLEAEAYRGSEAGLGSPRQVASPVHRGGSSPGVRNLQGSPESL
GSRSVASPSSRSRKGY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagcgtgaaaatgtcttcggaagtgtggttaagttgcgtcactcacgca
ttgtccaccgaaaccgaagaaatcatgggccttctcctcggcgacattcagcattccaaa
aacggcagcgtcacggcattgatatggggagcgtcgccgcaaacgaggtccgatcgccgc
aaggatcgcgtcgaaacgaatcccgagcagttggccgcggcctccgccctcgccgagagg
atgacctccgccaccggcagaaccaccagagtcatcggctggtaccactcgcaccctcac
attacggttctcccttcgcacgttgacgtgcggactcaggcaatgtatcagcttctcgat
tctggattcattggcttgattttttcatgctatagtgaggatgtaaacaaggtgggaagg
attcaggtcattgctttccagtcctctgatgggaagcagagttccatttcacggcctgtg
cctttgtctcctgtaaatagaagctctgttattgatattgattcgtcgcccagttcctcg
gagaatgtctctgtgcgatctggttactttaaggcagatggcactgagcaagacaccggg
gattcgacaagtgttggtgctagtaaggatgggggaagatcagacttagggaatttcttc
gctaatgctgatgccaactatctagggagagataaaagtggaggaaactaccatctcaac
aatttggagtccaacacagttgatgttgatcccatggatatgtcagaaagtatgcaggag
gctatgcatcgttcaaatttggaaatgagtggtgcagaatatgtaagaaaagaaattcct
cttcatgttttgccagccccatcactaatcaaccttgattcaccactatcgtcatacaca
gatctgcaacgtgtactatttgaagaggagcaaaatgcttataatcaagccatctcacaa
aatatgagagatgggaaagtgcatccactgactttcatacaccatacttcaacttatcag
gcttccttgtgcaagttgattgaatattgtttaagtcctgcaataaatgcacttcaagat
cgactgagagagaatgaaattcggttagcatttctgagtgaagaagccaaaagtctggag
gctgaggcatatagagggagtgaggcaggtttgggatctccacgtcaagttgcatctcct
gtacatcgaggaggttcctcccctggtgtgagaaacttgcaaggttctcctgaatcactc
ggttctaggagtgtagctagtcctagtagccggagcagaaaaggatattaa
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