KEGG   Cajanus cajan (pigeon pea): 109805819
Entry
109805819         CDS       T04868                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109805819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccaj03041]
    109805819
Spliceosome [BR:ccaj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109805819
 Complex B
    109805819
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 109805819
NCBI-ProteinID: XP_020223623
LinkDB
Position
10:21458581..21464346
AA seq 600 aa
MAEYDERYEGNGEEEELHNSHPHPHPHPDSSPQPNHDDLIDSKSHHGSRDYDRESSRSRD
KEREKGRDRERKREKGRDRERERSRDRDSERSREKDRDREKSKDRERERERDGEKERDRD
RDRHHRDRHRERSERRERTRDRDDDDYYRSRDYDRRRDYDREDRHRRRSRSRSASQSGGR
SEHRSRSRSRSKSKRTSGFDMAPPASAMLAGASAVTGQITGANPAIPGMFPNMFPLATSQ
LQPFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGD
AVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQ
PNPNLNLAAVGLTPGSAGGLDGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRE
TGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQGANPQQPKPEQESILMHA
QQQIALQKLMLQPALVATKVVCLTHAVSADELKDDEDYEEILDDMRQECSKFGTLVNVVI
PRPPPDGEPAPGVGKVFLEYVDVDGATKARAGLNGRKFGGNQVIAVFYPENKFAQGDYEG
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggccgaatacgacgagagatacgaagggaacggagaagaagaagagcttcacaattcc
catcctcatcctcatcctcatcctgattcctctcctcaacccaatcacgacgatctcatc
gattccaaatctcaccatggatctcgcgattatgacagagagtcttctagaagcagagat
aaggaacgggagaaagggagagaccgggagaggaaaagggaaaaggggagggacagggaa
agggagagaagtagggatagggattcagagagaagcagggagaaggatagagatagggag
aaaagcaaagacagggagagggagcgagagcgtgatggtgagaaggaaagagaccgtgac
agggatcgccatcatagagatcgacacagggaacgcagtgagagaagggaaaggacaagg
gatagagatgatgatgattattacagaagccgtgactatgacagacgaagggattatgat
agagaggacaggcacaggcgcaggtctcggtctcggtctgcttcccagtcagggggtcga
tctgagcatagatcaaggtcacgttcacgctcaaagagcaaaaggactagtggttttgat
atggctcctcctgcctctgctatgttggctggtgcttctgctgtcacaggtcagatcact
ggggcaaatcctgcaattcctggaatgtttccaaatatgtttccattggctacaagtcag
ttgcagccatttagtgctcttcctgtcatgccagttcaggctatgacacaacaggctaca
cgacatgctaggcgggtgtatgttgggggcctccctcctacagctaatgagcagtcggtt
gcaactttcttcagtcaagttatggctaagattgggggaaatactgctggcccaggtgat
gcagtggtcaatgtttacattaatcatgacaagaagtttgcctttgtggagatgaggtct
gttgaggaagctagcaatgctatggctttggatgggattatttttgagggggcacctgtc
aaggtcaggagacctactgattataatccttccttagctgctaccctaggtccaagccaa
cctaacccaaaccttaatttggctgctgttggcttaacacctgggtcggctggtggactt
gatggtcctgatcggatttttgttggtggacttccttattactttactgaaacacagatc
agagagcttttagagacttttggtcctctacgcggttttgatctagtgaaagatagggag
acgggtaactcaaagggttatgcattttgtgtttatcaggatcttgcagtcacggatatt
gcatgtgctgctctaaatgggataaaaatgggagataagactcttacagttagacgagct
aatcaaggtgcaaacccacaacagcctaaacctgagcaagagagcattttaatgcacgca
cagcaacaaattgcactgcagaaacttatgttgcagccagcgttagtggcaacgaaggtg
gtgtgtttaactcatgcagtttctgctgatgagctcaaagatgatgaagactatgaagag
attcttgacgatatgagacaggagtgttccaaatttggtacattggtaaatgtggtgatc
cctcgtcccccgcctgatggtgaacctgcccctggagttggaaaggtgtttttggagtat
gttgatgtagatggtgctactaaggcccgtgctggattgaatggacgaaaatttggtgga
aatcaagtaatagctgttttctatccagagaacaaatttgctcagggagattatgaaggc
taa

DBGET integrated database retrieval system