Cajanus cajan (pigeon pea): 109805914
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Entry
109805914 CDS
T04868
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
ccaj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109805914
03083 Polycomb repressive complex
109805914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109805914
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109805914
Histone modification proteins
HAT complexes
HATB complex
109805914
HDAC complexes
Sin3A-HDAC complex
109805914
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109805914
PRC2.2
109805914
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109805914
Heterochromatin formation proteins
Other heterochromatin formation proteins
109805914
Chromatin remodeling factors
NuRD complex
109805914
NuRF complex
109805914
NuRF complex (fruit fly)
109805914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
109805914
NCBI-ProteinID:
XP_020223790
LinkDB
All DBs
Position
10:complement(453329..457997)
Genome browser
AA seq
465 aa
AA seq
DB search
MNGESSLMEREMKEKAKGCCSVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPLLEE
ATYKNRHRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTIL
HPGEVNRIREFPQNNSIVATHTDSPEVLIWDVETQPNRHAVLGAATSRPDLVLKGHKDDA
EYALAMCPTEPFVLSGGKDKCVVLWSVHDHISTLAVEADSDDKQGSIIGGNNEKGKENSS
IGPRGIYEGHTDTVEDVQFCPSSAQEFCSVGDDSRLILWDARVGSAPVVKVDKAHRGDLH
CVDWSPHDINFILTGSADNTIHMFDRRNLKSGEVGSPVYKFEGHDAPVLCVQWNPDKSSV
FGSAAEDGIVNIWDHDKVGKTTADSADSTSPGLFFRHAGHRDKVVDIHWNASDPWTIVSV
SDDCESSGGGGTLQIWRMMDLIYRPEEEVLDELEKYHSHIFECNS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagagtcatcattgatggaaagggagatgaaggagaaagcaaagggttgttgt
tcggtggaagagaggtacactcagtggaagtccctcgttcccgttctctacgattggctc
gccaaccacaacctcgtttggccttctctctcttgcagatggggccctctactggaggaa
gccacttacaagaaccgccaccgtctctatctctccgaacagactgacggcagtgttccc
aacactctcgttattgccaattgtgaggttgttaagcccagggttgctgctgccgaacac
atctctcagtttaacgaggaagcgcgctctccctttgttaagaagcacaaaactattcta
caccctggcgaggtgaatagaatcagggaatttccacaaaataatagcatagtagccact
cacacggatagtcctgaggtactaatttgggatgttgaaactcaaccaaatcgtcatgcc
gttctgggggcagccacttcccgtccagacctggtattaaagggccataaggatgatgct
gaatatgctctggctatgtgtcccactgagccctttgttctttctggagggaaggacaag
tgtgtggttttatggagtgttcatgatcatatttcaactttagcagtagaagcagattcc
gatgataaacagggctctataattgggggcaataatgagaaaggtaaagaaaactcttct
attggaccaagaggcatttacgagggacacacagacactgttgaggatgtgcaattttgc
ccatcaagtgcacaagagttctgtagcgtaggtgatgattctcgcctcatactctgggat
gcacgagttggatctgctccagttgttaaggttgacaaggcgcatcgcggggatcttcat
tgtgttgattggagtcctcatgatataaattttatcctgactggttctgctgataataca
attcacatgtttgatcgtcggaatcttaaaagtggcgaagttggatcacctgtttataaa
tttgaaggtcatgatgcaccagtcctctgtgtacagtggaatcctgataagtcgtctgtg
tttggaagtgctgctgaagatggcattgtaaacatctgggatcatgacaaggttggtaaa
acaacagcagattctgccgattcaacatcccctggtttattctttcgacatgctgggcac
agggacaaggttgttgacatccactggaatgcatctgatccatggacaattgttagtgtc
tccgatgattgtgaaagtagtggtggaggtggcaccctacagatatggcggatgatggat
ctaatatatcgaccagaggaggaggtgctcgatgagctggaaaagtaccattctcatatt
tttgaatgcaactcatga
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