Cajanus cajan (pigeon pea): 109805977
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Entry
109805977 CDS
T04868
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109805977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109805977
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109805977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
DUF5088
CDC48_2
Motif
Other DBs
NCBI-GeneID:
109805977
NCBI-ProteinID:
XP_020223884
LinkDB
All DBs
Position
10:complement(1841847..1844670)
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AA seq
318 aa
AA seq
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MAYDRDDQYATFEQMYRCYPVSFIEKSDLEKGDKIIMPPSALDRLASLHIEYPMLFQLKN
PSAGKVTHCGVLEFVSDEGIIYIPYWMMENMLLQEGDIVNVKNTNLAKGTYVKLQPHTKD
FLDISNPKAILETSLRTYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDF
APPLDYKEPEKQAKSILSDRKQPLVEDEPPAKIARFSPFTGSGRRLDGKPSTQPVEQISS
PELKQKQTDKEIKGSDSKSSNTASHRPHGKLVFGSNATTSGTQTTPKVSQTNTNQEKSQK
EEEPTFKAFTGKKYSLKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgacagggatgatcaatatgcaacctttgaacagatgtatcgttgttaccct
gtctccttcatcgaaaagtcagatctggaaaagggtgataagattatcatgcctccctca
gccctggatcgccttgcgtctttgcacatagagtatcccatgttatttcaacttaaaaat
ccttctgccggaaaagttacccactgtggggtgctagaattcgtatctgatgaagggatc
atatacataccatactggatgatggaaaatatgctcctacaagagggagacattgtaaat
gtgaaaaacaccaatcttgcaaaaggaacatatgtgaagctgcagcctcacacaaaggat
tttttggatatctcgaatccaaaagccatcttagagacttcacttaggacctactcatgt
ttaacaactggtgacactataatggttgcctataacaacaagaagtattacattgacata
gttgaaaccaaaccctctcctgcagtcagtataattgaaacagactgtgaagttgatttt
gctccacctcttgattataaagaacctgagaaacaagcaaaatctattctatctgacagg
aaacagccattagttgaagatgagccaccagcaaagattgcacggttcagtccattcact
ggttctggaagacgtttagatgggaaaccctcaacacaaccagttgaacaaatttcttct
ccagagctaaagcaaaaacaaactgacaaagaaatcaaaggttctgattctaagtcatca
aatactgcttctcatagacctcatggaaagcttgtgtttgggtcaaatgcaactacatct
ggcactcaaacaacacccaaggtttctcagacaaacaccaatcaagagaaatcccagaag
gaagaagaaccaacattcaaggctttcacaggaaagaagtattcattaaaaagttga
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