Cajanus cajan (pigeon pea): 109806075
Help
Entry
109806075 CDS
T04868
Name
(RefSeq) uncharacterized protein LOC109806075 isoform X1
KO
K24738
rabconnectin-3b
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109806075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109806075
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109806075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
TOR1L1_N
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
PAC11
Beta-prop_DCAF12
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
109806075
NCBI-ProteinID:
XP_020224014
LinkDB
All DBs
Position
10:complement(3200819..3213055)
Genome browser
AA seq
1478 aa
AA seq
DB search
MTYNEVRIGSSMKCKSVACIWSGTPFPHRVTAVAALTEPPTPSFYTAGSDGSVIWWSLSH
SNPTSPPQVQAVAVLCGHAAPVTDLAVCSPIAGAENGFGSSTSKFTALISACCDGFLCVW
SKNSGHCRCRRKLPPWVGTPRIIRTLPSTPRYVCIACSFDDYSVINEGAIDRETQPRKPS
KCTILIVDTYSLSITQTVFHGILSIGPIRFMALVLGDGEKRNSVFVADSAGRGQMVLISE
DGGESLAASLGDQGQLESSFCYEGLSGVEKIESVLTYGNLVAFILKDRCVFRLLNGDTVI
GEVSFVDSLFGLDWGSAKTYAIGGIFLESDNVGNANEDGNSITVQFVLWNNVGYAVIYNV
SYKNDVFLCEPHSEIPGACYQPDVRLSVSFQQVNRYLVCIKSVCFNYEDPLLWRPFATVW
SLHHFDDEPGRLYRQCRVISDGVSFSNWFEKSTQLKGLDGLETTPTFGASPSSDDVDNTN
VDSTSNYYDYKGKVVSSSMIISENLFTPYAVVYGFLSGEIEVVRFDLFQGICFDGASSNP
DEKSTSCKQYFSGHTGAVLCLAAHQMMGSAKSWTFKRVLVSGSMDYTVRIWDLDTGSLIM
VMHHHVAPVRQIILPPSLTVHPWSDCFLSVGEDACVALVSLETLRVERMFPGHMNYPSKV
IWDGARGYISCLCQTHYGTSDATDVLYIWDVKTGSRERVLRGTAAHSMFDHFCKSISMNS
ISGTLLNGNTSVSSLLLPIVDDARFSNSPLNRSDNMLTSSRSSPNISNMTELNSSKTNAG
KGNSLKPKLSSLTGLLSSKLPIKCSCPFPGIVSLCFDLTSLMLSYQKNESMENGGGKPVN
INLKQQGAQEQNPSHHTSKTFEGHDLISLFEEYLLRYSLSFLHSWSVDKELDNLLISDMK
LRRPENFIVASGLLGDKGSLTLTFPVQSATLELWKSSSEFCAMRSLTMVSLAQRLISLSH
YGSAASSALAAFYTRNFLENFPDVKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIP
LPLCNSKATESHNMGSRTGSRDKHLGNMTEESISPKAEKQGISQDEESKILAWLESFEVQ
DWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKSSLAALVVHPLMKLAMAMNEKYSSTAA
ELLAEGMESTWKECIVSEIPRLIGDIFFQVELSGPSSKSVTEISEASFSIKQTLVEVLLP
SLAMADIPGFLTVIESQIWSTASDSPVHMVSLLTLIRIMRGSPKNLAQYLDKVVSFILQT
IDPSNSVMRKACFQSSMTTFKEVVRVYPMVAVNDSWTKLAVGDVIGEVNNANIRVYDMQS
VTMVKVLDASGPPGLPTLLTAATSGTMLTTAISALSFSPDGEGLVAFSEHGLLIRWWSLG
SFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILETDRQLNFQDNAKDSNHG
DCLKQLLHNLDLSYRLEWAEGRKVLLTRHGHELGTFQL
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgacatataatgaagtgagaattggatcatccatgaagtgcaaatcggtagcctgcata
tggtccggcacgcccttccctcaccgcgtcaccgccgtcgccgccctaaccgaaccacca
acgccgtccttctataccgccggatccgatggctccgtcatctggtggtccctctcccat
tccaatcccacttccccgccgcaagttcaggcggtcgccgtgttgtgcggtcacgccgca
ccggtcaccgatctcgccgtttgcagtcccatcgccggtgcagaaaacggtttcggttca
agtacaagtaaattcactgcgttgataagtgcgtgctgtgatggttttttgtgtgtgtgg
agcaaaaacagtggtcattgccggtgccggaggaaattgccaccgtgggtgggaactcct
cgcataattcgaaccttgccttcaactccgagatacgtatgtatagcttgttcttttgat
gattactctgttataaatgaaggtgctattgatagagaaactcagcctaggaagccctct
aagtgcactattcttattgtggacacgtattcgctttccattactcaaactgtgtttcat
ggaatcctatctattggtcccattaggtttatggctctggtgttaggcgatggtgagaag
aggaactcggtgtttgtggccgattcggctgggagggggcagatggttttgatttcggag
gatggaggggaaagcttggcggcttcacttggagatcaaggtcaattggagagttctttt
tgctatgagggattgagtggtgtggagaaaattgagtcggttttgacgtatggaaatctt
gttgcttttatattgaaagacaggtgtgtgtttaggttgttgaatggtgatactgtgatt
ggagaggtttcttttgtggacagtctgtttggtttggattggggttctgctaaaacatat
gctattggtggcatttttcttgaaagtgacaatgtggggaatgccaatgaagatggaaat
tcaattacagtacaatttgttctgtggaataatgtaggttatgcagttatatataatgtg
tcgtataagaatgatgtttttctttgtgaaccccattctgagattcccggggcttgttat
caacctgacgtgagactatctgtttctttccaacaagtaaatcgatatcttgtgtgcatc
aagtcagtttgctttaattatgaggaccctttactatggagaccgtttgccacagtctgg
tcactgcaccattttgatgatgaacctggtagattgtaccgtcaatgcagagttatcagt
gatggtgtatctttctcaaactggtttgagaagtctactcagctcaagggactggatggt
ctagagactacacctacttttggtgcgagtcctagttctgatgatgtagacaacacaaat
gtggatagcacaagtaattattatgattacaaagggaaggtagtttcttcttccatgatt
atctctgagaacctctttactccttatgctgttgtatatggttttttaagtggagaaata
gaggttgtgagattcgatctgtttcaagggatttgcttcgatggtgcaagttccaatcct
gatgaaaaatcaacttcatgcaaacagtacttctcaggacatacgggtgctgtactttgt
ttggcagcacatcaaatgatgggtagtgccaaaagctggacttttaaacgggttttggtg
tctggaagtatggattacacagttcgtatatgggatcttgacactggcagtcttattatg
gtaatgcatcatcatgtggctcctgtgcgtcaaattattcttcccccttctttgaccgtg
catccatggagtgattgcttcctttcagttggagaggatgcatgtgttgctcttgtttct
cttgagactctgcgagtggagagaatgtttcctggacacatgaactatccttctaaagtt
atatgggatggagcaagaggttatatttcatgtctctgtcaaacacattacggaacttct
gatgctactgatgtattatacatttgggatgtaaagacaggttcacgcgagcgagtccta
cgtgggaccgctgcgcattcaatgtttgatcatttttgcaaaagcataagcatgaattcc
atatcaggcacattgctgaatggaaatacatcagtctcttcattacttcttccaatagtt
gatgatgcaaggttctctaattcccccttaaatcggtcagacaacatgcttacttcatca
agatcgtcaccaaatatttcaaatatgactgagctgaattcttccaaaacaaatgcaggt
aaaggaaattcattgaagccaaaattgtcctctctgactggtcttttgagtagcaagctt
cctatcaaatgctcttgcccattcccggggattgtgtctctgtgttttgatcttacatca
ttgatgctctcttatcaaaagaatgagtccatggaaaatggtggtggcaagccagtgaat
atcaatttgaagcaacagggagcccaggaacaaaatcccagccaccatacttcaaaaact
tttgagggtcatgacttgattagcctattcgaagaatacttacttcgatatagcttgtca
tttctgcattcgtggagtgtagacaaagaacttgataatttgctgataagtgacatgaag
ctgaggagaccagaaaattttatagtagcttctggtctgctgggggataaagggtcattg
acattgacgtttcccgttcagagtgctactcttgagctctggaaatcatcatctgagttt
tgtgcaatgagatcattgacgatggtatcccttgcccaacgtttgattagcttgtctcac
tatggttcagcagccagcagtgctttagcagccttttatactcggaatttcctggaaaat
tttccagatgtgaagccaccttcattacagctcttggtggctttttggcaagatgaaagt
gaacatgtacgtatggctgcacgttctatatttcactgtgctgcctctcatgctattcct
ctgcctctatgcaattcaaaagccactgagtcacacaatatgggttcccgaactggaagt
agagacaaacatctaggaaatatgacagaagaaagcatatctcctaaggcagaaaaacaa
ggaatttcccaagatgaggaatctaagatacttgcttggctggagtcatttgaagtgcaa
gattggatttcttgtgttggtggaaccagtcaggatgcaatgacatcccacattattgtt
gctgctgcactggctatctggtaccctagtcttgtgaagtcaagtcttgccgcactagtt
gttcatccattaatgaaattggctatggctatgaatgagaagtacagctccactgctgct
gagctccttgcagagggtatggagagtacatggaaagaatgcatagtctctgagattcct
cgcctgattggggatatttttttccaagtagagttgagtggcccatcttccaagtcagtg
acagaaatttcagaagcatctttttctattaaacagactttggtggaggttcttcttcca
agtttagctatggctgatataccaggctttttgactgtgatagaaagccaaatttggtct
actgcatctgattcacctgtccacatggtgtccttgttgactcttataaggatcatgcgt
ggttctccgaagaatttggctcaataccttgacaaggtggtcagcttcattttacagact
atagatcctagcaactcagtcatgcggaaggcatgcttccagagttcaatgacaactttc
aaggaagttgtacgtgtatatcccatggttgctgtcaatgattcatggaccaaacttgca
gttggagatgtgattggagaagttaacaacgcaaacattagggtttatgatatgcagagt
gtgacaatggtaaaggttttggatgcaagtggccctccaggacttccaactctgctcaca
gcagcaacatcaggaacaatgttgactactgcaatttcagcactgagcttttcaccagat
ggagaggggctggttgctttttctgaacatgggctgttgattagatggtggtcactggga
tctttctggtgggagaaactaagccggaactttgttcctgttcagtgcaccaaactaatc
tttgttcctccctgggaaggattttcacctaattcatccaggtcaagcataatggccaat
attttggaaactgacaggcagctgaacttccaggataatgcgaaggattcaaatcacggg
gactgtctgaaacaattgcttcataacctggatctgtcctatagactagaatgggctgag
gggcggaaagtacttcttacaaggcatggtcatgaattgggcacttttcagttataa
DBGET
integrated database retrieval system
