Cajanus cajan (pigeon pea): 109806121
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Entry
109806121 CDS
T04868
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109806121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109806121
Membrane trafficking [BR:
ccaj04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
109806121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
109806121
NCBI-ProteinID:
XP_020224082
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All DBs
Position
10:14132772..14137694
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AA seq
199 aa
AA seq
DB search
MKITALLVLKCTGEGSDPVILANASDVSHFGYFQRSSVKEFIVFVGRTVAKRTPQGQRQS
VQHEEYKVHTYNRNGLCALGFMDDHYPIRSAFSLLNQVLDEYQKTFGESWRTAQEDNSQP
WPYLNEALQKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgcgttgttggtgcttaaatgcacgggcgagggttccgatcccgtgatt
ctcgccaacgcttccgacgtaagccacttcggttacttccaacgctccagcgttaaggag
ttcatcgtcttcgtcggtcgcaccgtcgccaaacgcacccctcagggccaacgccaatcc
gtacaacacgaagagtacaaggtgcatacctacaacagaaatggtctttgcgcgttggga
tttatggatgatcattacccgattcgaagtgccttttctcttctcaaccaggtgctcgat
gaatatcaaaaaacttttggtgagtcatggaggactgctcaggaagacaatagtcaacca
tggccctatttgaatgaagctctgcaaaagttccaggatcctgcagaggctgacaagttg
ttgaaaatccagagagagttggatgaaacaaaaatcatccttcacaagactattgatagt
gtgctggctagaggggagaggctggacagtttagttgagaagagttctgatctgagtgct
gcatcgcagatgttttacaaacaggcgaaaaaaaccaatcagtgttgtaccatattgtaa
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