Cajanus cajan (pigeon pea): 109806123
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Entry
109806123 CDS
T04868
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109806123
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109806123
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109806123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_10
Zn_ribbon_6
zf-RING_4
Sina_RING
Prok-RING_4
Zn_ribbon_RlmA
zf-ANAPC11
Peptidase_C74
Motif
Other DBs
NCBI-GeneID:
109806123
NCBI-ProteinID:
XP_020224085
LinkDB
All DBs
Position
10:complement(19467681..19472244)
Genome browser
AA seq
201 aa
AA seq
DB search
MFWSVTGDMSSRTARSTRRRKMNLELDLNRDPPAENVREEEEGPSTQHQQQQLPMIDVEA
IDDDVVESSPRSFAQAKSNNARRRVRRRMVVDVDLEEETRGDPQNQTIINGALYINLESS
SCSVCENARKSPECPKEPPKEPVFNCPICMAPLVEEMSTRCGHIFCKNCIKAAVAVQGKC
PTCRKKVTKNQLIRVFLPATS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgttttggtcggtgacaggtgacatgagttcgcgaacggcgaggagcacgcggcggagg
aagatgaatttggagctcgacctcaaccgtgatccacccgccgagaatgttcgggaagag
gaggagggaccctccacgcagcatcaacaacagcaacttcccatgattgacgtcgaagcc
attgatgacgatgttgtagaatcttcacctaggtctttcgcgcaggctaagagcaataat
gcgaggaggagagttcgcaggaggatggttgttgatgtggacttagaagaagagacaaga
ggtgatccccaaaaccaaacaatcatcaatggtgctctttatataaatttggaaagcagt
agctgttctgtgtgtgaaaatgctaggaagtcacctgaatgtcctaaggagcctcctaag
gagcctgtatttaattgtccaatatgtatggctcctttggtagaagaaatgtcaacaagg
tgtggtcatattttttgcaagaattgcattaaagcggctgtagctgtacagggtaaatgc
cctacatgtagaaagaaggttacaaagaaccagctaataagggtgtttcttccagcaact
agttaa
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