Cajanus cajan (pigeon pea): 109806148
Help
Entry
109806148 CDS
T04868
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj00040
Pentose and glucuronate interconversions
ccaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109806148
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109806148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109806148
NCBI-ProteinID:
XP_020224116
LinkDB
All DBs
Position
10:12243142..12245191
Genome browser
AA seq
451 aa
AA seq
DB search
MARLEVNHFFLILLSLAVIIPTLNANILEKDEYWQNHVNDFDPYWQERAKTAKKNSEAAY
FQDPYSLSGNLTTSVSDLIVGKNNARRNLKGRNKGAECLATNPIDRCWRCDPNWANNRQK
LADCVQGFGRNTVGGKGGPIYVVTDPSDDELVNLKPGTLRHAVTRDGPLWIIFARSMLIT
LQQELIMNSNKTIDGRGVEVYIANGAGLTVQFVSNIIIHGIKIYDIKVGQGGIIRDSETH
FGQRTMSDGDGISVFGASNIWIDHVSMRNCSDGLIDVIMASTAITISNGHFTDHNEAFLF
GARDECESDKVMQVTLAFNHFGKRLVQRMPRVRYGFVHSVNNDYTHWEMYAIGGSQNPTI
ISEGNRFIGPNIRFAKEITKREYTDESIWKNWQWRSINDVYMNGAFFVESGPELVNRPFS
RQDMITAKPGSYVGRLTRYAGSLRCRVGLPC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattagaagtcaatcatttttttcttattttgctctctttggccgtcattatt
cctaccctgaatgccaatatcttggagaaagatgagtattggcagaaccatgtcaatgac
ttcgatccttattggcaggaaagggcaaaaactgctaaaaaaaacagcgaggctgcttat
tttcaagacccctattcactctccggcaacctcactacctctgttagcgaccttatagtt
ggaaagaataatgcaagaaggaacctgaaggggagaaacaagggagcagaatgcttggcc
accaaccccattgacaggtgctggaggtgtgaccctaactgggccaacaacaggcagaag
cttgcagattgcgtgcagggattcggcagaaacacggtcggaggcaaaggtggtcccatc
tacgttgtcacagacccctcagacgatgaattggttaacctaaaacctgggactcttcgt
cacgcggtcacacgcgatggtccactctggatcatctttgcacgcagcatgctcatcacc
ctccagcaggagctcatcatgaacagcaacaagaccatcgacggaagaggagttgaggtt
tacattgccaacggcgctggcctcactgttcagtttgtcagtaacatcatcatccacggg
atcaagatctacgacatcaaggtcggtcagggtggcattatcagagactccgagacccat
tttgggcaaaggactatgagtgacggcgatggaatttccgtcttcggtgctagcaacatt
tggatcgatcacgtttccatgagaaactgctccgatggactcattgatgtcatcatggcc
tccactgctatcaccatttccaacggccatttcactgaccacaacgaggcgttcctgttc
ggtgctcgtgacgaatgcgaatctgataaagtcatgcaagtgacactggcattcaaccac
tttgggaagagattagttcaaaggatgcccagagtgagatatggttttgtgcattcggtt
aataacgactacactcactgggaaatgtatgccattggtggcagccagaaccccaccatc
atcagcgagggtaaccgatttataggtcctaacatcaggtttgcaaaagagattacaaag
agagaatacacagatgagagcatttggaagaattggcagtggagatcaatcaacgatgta
tacatgaatggagcattttttgtggaatcagggcctgagctcgtaaacagacccttctca
aggcaagacatgatcacagctaagccagggagttacgtgggaaggctgacacgctatgct
ggaagccttaggtgcagagtgggtctaccttgttaa
DBGET
integrated database retrieval system
