Cajanus cajan (pigeon pea): 109806387
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Entry
109806387 CDS
T04868
Name
(RefSeq) high mobility group B protein 13
KO
K09273
upstream-binding transcription factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109806387
03021 Transcription machinery [BR:
ccaj03021
]
109806387
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
109806387
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
109806387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
109806387
NCBI-ProteinID:
XP_020224365
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All DBs
Position
10:3545385..3547856
Genome browser
AA seq
443 aa
AA seq
DB search
MADAAAEVVVPKRGRGRRPLKDKTTTLLTSDDNKQDSKNHQSFEKELLHMQEMLQKMRLE
KEHTEELLKAKDEALKQKEQELKKLQKLKEFKPTLNLPVLKDNEQKKDKKKKGCSEKKRP
SPPYILWMKDQWNEIKKTNPEAEFKETSNMLGAKWKTVSAEEKKPYEEKYQAEKEAYLQV
VAKEKRESEAMRLLEEEQKQKTAMELLEQYMQFKQEAENKGKKNKKEKDPLKPKHPMSAY
FMFTNDRRPALAAENKTMLEVTQITAEEWKKMIDDERRPYEEMAKRNKEKYVLEMEAYKQ
KKEEEAANLMKEEEEHMKLQKQEALQLLKKKEKTENLIKKTKQKKQNKEDKNSDPNRPKR
PPSSYLLFSIEARKSLQEERPGINTSTLNALVSLKWKELSEEDRLIWNVQACKAMESYKK
ELEEYNKSLAATSTAIQEQKTEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcagctgctgaagtagtagtcccaaagaggggaaggggcagaaggcccctg
aaggataaaacaacaaccctactcacatctgatgataacaaacaggactccaagaatcac
caatctttcgagaaagaattgctccacatgcaggaaatgcttcagaaaatgcgtctcgag
aaggagcacacagaagagctcttgaaggccaaagatgaggctctcaagcagaaggaacaa
gaactcaaaaaattgcagaagctcaaggagtttaaacctaccctcaatttgcctgtgttg
aaagataatgaacaaaagaaggataagaagaagaaagggtgctccgagaagaaaaggcct
tctccaccttacattttgtggatgaaagaccaatggaatgagatcaagaaaacgaaccct
gaggcagaatttaaggaaacttctaacatgttgggggctaaatggaagactgttagtgca
gaagagaagaagccttatgaggagaaataccaagctgaaaaagaagcctatttgcaagtg
gttgcaaaggaaaaacgtgagagtgaggcaatgaggttgttggaagaggagcagaagcag
aagactgccatggaattgcttgaacagtacatgcaattcaaacaagaggcagaaaacaag
ggcaagaagaacaaaaaggagaaggatccattgaaaccaaagcaccccatgtcagcttat
ttcatgttcactaatgataggcgaccagctcttgctgctgagaacaagacaatgttggag
gttacacaaatcacagctgaagagtggaaaaagatgatagacgatgaaaggagaccctat
gaagagatggcaaagaggaacaaggagaaatatgtcttagaaatggaagcctataaacag
aaaaaagaagaggaagctgccaatctcatgaaggaagaggaggagcatatgaagcttcag
aaacaagaagccttgcaactccttaagaagaaggagaaaactgaaaatttaatcaagaaa
acaaaacagaagaagcaaaacaaggaggataagaattctgatccaaacaggcctaagagg
cctccatcctcgtacctcttattcagcatagaagcaaggaaaagtttacaggaggagaga
ccaggaatcaacacctcaaccctgaatgcacttgtttccttgaagtggaaggaactgagt
gaggaagatagactaatctggaatgtgcaagcatgtaaagcaatggaatcatacaagaag
gaattggaggaatacaacaaatcccttgcggcaacttcaactgcaatccaggagcagaaa
accgaagaatga
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