Cajanus cajan (pigeon pea): 109806491
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Entry
109806491 CDS
T04868
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03020
RNA polymerase
ccaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109806491
09124 Replication and repair
03420 Nucleotide excision repair
109806491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109806491
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109806491
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109806491
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109806491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
109806491
NCBI-ProteinID:
XP_020224503
LinkDB
All DBs
Position
10:complement(6333481..6337364)
Genome browser
AA seq
318 aa
AA seq
DB search
MEGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV
SSKDLYSSDHSVVPVDFSDPSNHESSDNRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYD
DEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgtatcgtacgcgcgcatgcctcgggtgaaaattcgcgagctgaaggacgat
tacgcgaagttcgagctgcgcgatacggacgcgagtatcgcgaacgcgctgcggcgcgtg
atgatcgcggaggtgccgacgatcgcgatcgacctggtggagatcgaggtaaactcttcg
gtgctcaacgacgagttcatagcgcacaggctcggcctcattccgctcactagcgagcgt
gcaatgtccatgcgcttctcacgtgactgcgacgcctgcgacggcgacggccagtgcgag
ttctgctccgtcgagtttcatcttagggttaagtgtatgactgaccagacactcgatgtc
tccagcaaggacctctacagttccgaccattccgtcgttcccgtcgatttctctgaccct
tctaaccatgaatccagcgacaacaggggaattatcattgtgaagttgaggcgaggacag
gagctgaggctgagggcgatagctaggaaggggattggcaaagatcatgccaaatggtca
cctgctgcaactgtcactttcatgtatgaaccagagattcatataaacgaggacttgatg
gagacattgactcttgaagagaaaagagaatgggttgatagtagtcctactcgtgtgttt
gaaattgatccagtaacacaacaggtcatggtggttgacgctgaggcatacacatatgac
gatgaggtgcttaagaaggcagaagctatgggcaagccagggcttgtagaaattattgcg
aggcaggatagtttcatattcacagttgaatctactggggcaattaaagcttctcaatta
gtactaaatgccatagaaattctcaagcagaagctggatgctgtgcggctatctgaagat
acagtggaggcagatgatcagtttggtgagctaggtgcacatatgcgaggtggatga
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