Cajanus cajan (pigeon pea): 109806548
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Entry
109806548 CDS
T04868
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109806548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109806548
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
RNases
109806548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
HH_AprE
Bap31_Bap29_C
DUF641
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
109806548
NCBI-ProteinID:
XP_020224580
LinkDB
All DBs
Position
10
Genome browser
AA seq
505 aa
AA seq
DB search
MEGKIETADKKVLVDIVKLAQKRGLKGKLGGWKEFLNSYDKKFGASMSDPSKRSHEILAA
FLNTFSKEEDLKFFDNIMRHHSNQYTLEKLKDKSHDSPEQRLVQLTLQHPLYPLDYSFSS
IDEEWIVINLKNKSKVMKSTAMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNQLVKPD
KEIADYRTEITGISSQDLEAVTCSLADIQKSMKKLLPKGTILVGHSLHSDLRVLKLDYVR
VVDTAYIFQSLDGSIHRRPSLNRLCQAVLGHEVREKGAPHNCLDDARAAMNLVLARIKHG
VDREFPIPLIEEHVSESEMAKLLLHKIPNTVDNETLHKIVLGDFKIEVKPSRKGQGEYYT
ALAVFRNQQEADDAYENVQGSKLKDTNGLPQKRVTFRLSSGMTVNIFVRKMATNEPNDRT
PSKRALQMDEAVDASKKAKMDPKIEEDALTSFGKGDTEAHLNEIEELNQRLKQSEMEIES
LRKQLTQKDFEITMLHKLVSSLKKR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaagatagagactgcagacaaaaaggtactggttgatattgtaaaattggca
caaaaaagaggcctgaagggtaaactgggaggctggaaagaattcttgaacagttatgac
aaaaagtttggggcaagtatgagtgatccatcaaagagatcccatgagatattggctgca
tttctgaatacattttcaaaggaggaagatttgaagttttttgataacatcatgcgacat
cattcaaatcaatacacattggagaaactgaaagacaaatctcatgattctcctgagcag
aggctggtccaactaactctgcagcatccattatatccattggattattcattttcatcc
attgatgaggagtggatagttataaaccttaaaaacaaatctaaggtgatgaagtctact
gcaatggttgctgttgactgtgaaatggttctctgtgaggatgggactgaagcgttagtt
aaagtctgtgtggtagaccataatttagaggtcaaactaaatcaacttgtaaaacccgac
aaggaaattgcagactacagaacagaaatcactggtatctcttctcaagatctagaggca
gtgacttgctccttggctgatatacagaaatccatgaagaaattgttaccaaaaggaacc
atattagtgggacacagtttgcatagtgatttacgtgtgctgaagcttgattatgttaga
gtggttgacactgcatatatcttccaatcattggatggatctattcacaggagaccttct
ttgaatagattatgtcaggcagtgttgggccatgaagttcgggaaaagggtgctccacat
aattgtctagatgatgcacgtgcagctatgaatcttgttcttgcgaggatcaaacatgga
gtcgatagggaatttccaattccattgattgaagagcatgtttcagaaagtgaaatggca
aagcttcttcttcacaagataccaaacactgtagacaatgaaacactgcataaaattgtt
ctcggagacttcaaaatagaagtgaagccttccaggaaaggtcaaggagaatattatact
gccttggctgtttttagaaaccagcaagaggcagatgatgcctatgaaaatgtccaagga
agcaaattaaaggatacaaatggacttccacaaaaacgtgtaacatttaggctgagttca
ggcatgactgtcaatatatttgttcggaaaatggctaccaatgaacccaatgaccgtact
ccatctaagagggctttacaaatggatgaggcagttgatgcttccaagaaagcaaagatg
gatccaaaaattgaagaggatgccctgacaagctttggcaagggtgacactgaggcccat
ttgaatgagattgaagaactgaatcaaagattgaagcaaagtgagatggagattgaatca
ttgaggaaacagttgacacaaaaggattttgaaattaccatgttgcataaattggtatcc
tccttaaaaaagcgatag
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