KEGG   Cajanus cajan (pigeon pea): 109806572
Entry
109806572         CDS       T04868                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109806572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109806572
   03041 Spliceosome [BR:ccaj03041]
    109806572
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109806572
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109806572
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109806572
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 109806572
NCBI-ProteinID: XP_020224610
LinkDB
Position
10:complement(10191921..10198360)
AA seq 442 aa
MDLTKKRKIDENGFNDSSDPLKLSPSEARKLIDRFSPDQLLDILQDAVSRHPDVLAAVRA
AADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHV
DGALLALREPSKRIDGRVTVTQLAAAGNSASNANAADVALRKIYVANVPPDLPADKLLAH
FSVYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQAALLEPVKTVEGRQLSCKLAITDG
KQGKRAGPDGPQAHGNVQHGHGDGVGAGMGMGMGMPPNAGSGPGQYGPPVGVGSYGGFGG
QPPMGNHHPMNSSNPVPGSMAGAGGGYGGGMGGPYGGYGGPGSTGFGGAGGMGGGSGGVG
VGAGGGAGGGIGGGAGAGGGSLYRFPGSGGMPGGGGGYPDSGGHYSLSASGGYQNQHHPP
SGASPVPRVPPGSMYPNVPPYY
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggatctgacaaagaagcgcaaaatcgacgagaacggcttcaacgattcctccgaccct
ctcaaactctccccctccgaggcgcgcaagctcatcgaccgcttctcgccggaccagcta
ctcgatattcttcaggacgccgtctcccgccaccccgacgtcctcgccgccgtgcgcgcc
gccgccgaccccgacgtctcccagcgcaagctcttcatccgcggcctcggctgggacacc
accaccgacggcctccgctcgctcttctccaccttcggcgacctcgaggaggccgtcgtc
atcctcgacaaggccaccggcaagtccaagggctacggcttcgtcacgttccgccacgtc
gacggcgcgctcctcgccctccgcgagcccagcaagcgcatcgacggccgcgtcacggtc
acgcagctcgccgccgccgggaactccgcgtcgaatgccaacgccgccgacgtcgcgctc
cggaagatctacgtggccaacgtgccgccggacctccccgcggacaagcttcttgcgcac
ttttcggtctatggcgagatcgaggaggggcctttagggttcgataagcaaacggggaag
tcgaagggtttcgctttgtttgtttacaagactcccgaaggggctcaggctgcgttgctg
gagcctgtgaagactgttgaggggaggcagttgagttgtaaattggccattactgatggc
aagcaggggaagcgggctgggcccgatgggccccaggcccatgggaatgttcagcatggg
catggggacggtgtgggggccggaatggggatgggcatggggatgccgccgaatgccggg
tctgggcctgggcagtatgggcctcctgtgggggtgggctcttatggtgggtttggtggg
cagcctcccatggggaatcatcatcccatgaattcgtcgaatccggtgcccgggtctatg
gcgggtgctggcggtgggtacggtggtggaatgggtgggccttatggtgggtacggtggg
ccggggtcgacgggctttggtggggctggtgggatgggagggggtagtggaggtgtaggt
gttggtgctggtggtggtgctggtggaggaattggtggtggtgctggtgctggtggtggg
tctttgtatagatttccgggatcgggtggaatgcctggtggtggtggagggtatccggat
agtggaggacactatagtttatcagcttcgggtgggtaccagaatcaacatcaccctcct
tctggggcttcacctgtgcctagggttccgccgggttccatgtatcccaatgtgcctcct
tactactga

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