Cajanus cajan (pigeon pea): 109806649
Help
Entry
109806649 CDS
T04868
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109806649
Transcription machinery [BR:
ccaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109806649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Motif
Other DBs
NCBI-GeneID:
109806649
NCBI-ProteinID:
XP_020224708
LinkDB
All DBs
Position
10:complement(2985549..2989077)
Genome browser
AA seq
505 aa
AA seq
DB search
MGVVSFSSSASRTPLGLNTNFSSYRLKRPLTVAFKGDKHNDSALVATQDKVPVPLETAKT
QKKRVGKTNKVPKRERVENSSSSSDVDYNEAAAMLENIYKLSPAGDAECVDGKIKRVSRR
GKRLVDGTEKKELNSDRVVRSQNKIAKRLNLDQRISLKKNQGGDGVIPGRKRKNVKNRIE
KIEELIREYSVSTDFVSMDWKKMRIPPVLSSSEHAWLFKLMQPMKALLRVKEDLQKELAR
EPADGELADATNMSIAQVKKAMEVGQAARNKLIKHNLRLVLFVINKYFSDFASGPRFQDL
CQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQK
AKTELAFELQRSPTEEEIIKRVNISPKRYHDIMKASKSILSLNSRHTTTQEEFIDGIVDD
AAVNGDKRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGRGDRTLGEIAGNLNISREMV
RKHEVKALMKLKHSARLDYLRRYVV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgagtttttctagctcagcttctcgtactccacttggattgaatacaaat
ttttccagctatcgtctgaagagaccattaactgtggcatttaagggggataaacacaat
gactcggctttggttgcaacacaagacaaagttcctgtgcctcttgaaacggccaagacg
cagaagaaaagggtagggaaaactaacaaagtacctaagagagaaagagtggaaaattct
tcatcttcctcggatgtggactacaatgaagctgctgccatgcttgaaaatatatacaaa
ctcagtcccgccggtgatgcagaatgtgtagatggtaaaatcaaaagagtctctcggaga
gggaaaaggcttgttgatggaactgaaaaaaaggagttaaacagtgatagggtggtcaga
agccagaacaagatagctaaacgattgaatcttgatcagagaatttcattaaagaagaat
caaggtggggatggagtcattccaggtcgaaagaggaaaaatgttaagaatagaattgag
aaaattgaagagcttattagggaatattcagtatcaactgattttgtcagtatggattgg
aagaaaatgaggatacccccggttctttcttcttctgagcatgcttggttgttcaaattg
atgcaacctatgaaggcactgcttcgagtgaaagaagatttacagaaggagcttgctaga
gaacctgccgatggagaactagctgatgcaacaaacatgagcattgctcaagtaaagaaa
gcaatggaggttggtcaagctgcacgaaacaaacttatcaagcacaatctccggcttgtc
ttgttcgtgatcaacaaatatttttcagattttgcaagtggccctaggtttcaagatctt
tgtcaggcaggagttaagggacttattacagcaattgatcgttttgagcctaacaggaga
tttcggctatcaacatatagtttgttttggataaggcatgctatcattcgttcgatgacc
ctctcaaacttcacacgtgttccctttggacttgaatcggttcgagcagagatccaaaag
gctaaaactgagttagcatttgagcttcagaggtcaccaacagaggaagaaataataaaa
agagttaatatatcccctaaaagataccatgacataatgaaagcatcaaaatccattctt
tcgctgaactcgagacatacaaccacacaagaggagttcattgatgggatcgttgatgat
gctgctgttaatggtgataagaggcaacctgctctactaaggcttgctcttgatgatgtg
cttgattccttgaagccaaaggagagcttggtgatcagacagagatttggacttgatggg
aggggtgacagaacgttgggagaaattgctgggaacttgaatatatctagggaaatggta
agaaagcacgaagtgaaggctcttatgaagctcaagcattcagctcgattggattatctt
cgtcgctatgttgtataa
DBGET
integrated database retrieval system
