Cajanus cajan (pigeon pea): 109806755
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Entry
109806755 CDS
T04868
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109806755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109806755
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109806755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
109806755
NCBI-ProteinID:
XP_020224857
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All DBs
Position
2:complement(14832177..14836471)
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AA seq
310 aa
AA seq
DB search
MANLPQSISMSAASFGAPSASATKDRRMASVEHLVLELSNPDLRENALHELSKKRELFQD
LAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFL
NAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSM
EMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKH
IIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVRVPALQ
GGGFDHMMVS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttgccccaatccatctccatgagcgccgcctcctttggtgctccttctgcc
tccgccaccaaggatcgccgaatggcctccgtcgaacacctcgtcctcgaactcagcaac
cccgatcttcgggaaaacgctctccatgaactctccaagaagagagagttatttcaggat
ctcgctccattattgtggaattcctttggtactatggcagcacttttgcaggaaatagtt
tcaatataccctgttatttccccaccaaaccttactccggcacaatccaatcgagtgtgc
aatgctcttgctcttcttcagtgtgtggcatctcaccttgatacaaggatgcagttcctc
aatgctcatatacctttatatctgtatcctttccttaatacaacaagtaagtcaagacca
tttgagtatttgaggcttaccagtcttggagtcattggtgccttggtgaaggttgatgat
acagaagttataagtttccttctttcaacagagattattccgttgtgccttcgcagtatg
gaaatgggcagtgaattgtcaaaaactgttgcaacctttatagttcaaaaaatcctgttg
gacgaaattggtttgaaatatatttgtactacagccgagcgcttttatgcagtgggccga
gttttgggaaacatggtggcaactcttgtggagcaaccttcatgtcgtcttttgaagcat
atcattcgttgttatcttcgtctgtcagataatcagagtgcttgcgaggcattaagaacc
tgtcttccagacatgttgagagatgctacattcagtagttgccttcgtgaagacccaaca
gctaggaggtggctacagcagttgcttcataatatcggagtcagggtaccagctctacaa
ggtggaggattcgatcatatgatggtgtcgtga
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