Cajanus cajan (pigeon pea): 109806758
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Entry
109806758 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109806758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109806758
03009 Ribosome biogenesis [BR:
ccaj03009
]
109806758
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109806758
Spliceosome [BR:
ccaj03041
]
Complex A
U1 snRNP components
U1 related factors
109806758
Complex B
109806758
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
109806758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
109806758
NCBI-ProteinID:
XP_020224861
LinkDB
All DBs
Position
10:complement(415923..421419)
Genome browser
AA seq
498 aa
AA seq
DB search
MNRYDSRSGDPASYRDRRSDSGLAAPSTTGYGGSSRRDYEDSSNKFNLDGLPHFEKNFYT
ESPSVRAMTDAEVNDYRQRREITVEGRDVPKPVKTFHDIGFPEYVMQEIKKAGFVEPTPI
QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILEPGDGPIVLVLAPTRELA
VQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLR
RVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV
IIGSPDLKANHAIKQHVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR
MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL
EDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGAPPPP
AGGFRDRGKGYGSGRPWS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctacgacagtcgctccggcgaccccgcttcgtaccgcgaccgaagaagtgat
tcgggccttgctgcaccttcaaccactggctacggcggttcaagcagaagagactacgaa
gacagttccaacaaattcaatttggatggattgcctcatttcgagaaaaacttctacacc
gaatcaccctccgttagggcaatgacagacgccgaggttaacgactaccgtcaacgccgt
gaaatcactgtcgaaggccgtgacgtccccaaacccgttaagacctttcatgatattggt
tttccagaatatgtaatgcaagaaattaagaaagctggcttcgttgaacccacgcctatt
cagtcacaaggttggcctatggctttgaagggacgtgatcttataggaattgcggaaaca
ggatccgggaagacgcttgcatacttgttgcctgccatagtgcatgttaatgcccagcca
attcttgaacctggagatgggcctattgtgttagttttggccccgacgcgcgagcttgct
gttcagatacaacaagaggcgactaaatttggtgcgtcgtcgaggattaagagtacgtgc
atatatggtggggttccaaaagggcctcaggtgcgcgatctccagaaaggagttgagatt
gtaattgccactccgggaaggttgatagatatgcttgagtcgaatcatacaaacttgcgg
agggtcacatacctggtactggatgaagctgataggatgttggacatggggtttgatcct
cagataaggaagattgtctctcagattcgtccagaccgtcaaactttgtactggagtgcc
acatggccgaaggaggttgaacaattggcaaggcagttcctttataacccatacaaagta
attataggttctccagatttaaaagctaaccatgcaataaagcaacatgttgacattgtt
cccgaaaagcagaaatatgataaattggtgaagttgctggaagatatcatggatggcagc
cgaatactgatattcatggatactaagaaaggatgtgatcagataactaggcagctccgc
atggatggttggcctgcactttcaattcatggagataaaagtcaagcagaaagagattgg
gtgctctcagagtttaaatctggaaagagccctataatgactgcaacagatgttgcagct
cgtggtttagatgtgaaggatgtgaagtatgtgataaattatgacttcccgggatcactt
gaggattatgttcatcgcattggtcgaacagggagagctggtgcaaaaggaactgcatac
acattcttcacagctgctaatgccagatttgcgaaggaacttataaccattcttgaggaa
gctggacagagagtgagtcctgaattggctgcaatggggcgtggtgcaccccctccacct
gcaggaggtttccgagatcgtgggaagggttatggcagtggtcgcccatggagctga
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