Cajanus cajan (pigeon pea): 109806858
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Entry
109806858 CDS
T04868
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109806858
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109806858
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109806858
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109806858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-GeneID:
109806858
NCBI-ProteinID:
XP_020224982
LinkDB
All DBs
Position
2:26473013..26502004
Genome browser
AA seq
1485 aa
AA seq
DB search
MEGKTEDEVVDIESASSGSFNDDSDDEESLVPEVDDDVHLEEPLTEEEIQDLISELLEVE
SKAAEAQEALEEESLSKVESEVRQELKQNLQGDDLETAVADEMTTFKEEWEAVLDDLETE
SAHLLEQLDGAGIELPSLYKMIEREAPNVCSTEAWKKRNHWVGSLATAEIAMSIADAEKH
LQVNRPVRRRHGKLLEEGASGFLQKKLCDESQEPAKKETEGDWDLFNKIVSDGSGNDASF
GGKHWASVYLASTPQQAALMGLKFPGVDEVEEIDDVDGNSMDPFIAAAIANERELDLSEE
QRRKFKKVKEEDDAVVDRKLQIRLKHRRHQKKSKQREISTPILMMESHMQKSYGLNPVLK
DGTSDEGKIVSDNGKDTCVLMETNKIEGFDASHHVDKEKPMSTDDLLDPPKSSSDDIIEQ
RGIKRVNSGGFDADNKKCRIVIIDSDNEADVTEEKLDCNTQEVKEDLCNNGADSLPSERL
DEKFWCTVCDKVALEVHPHPFLKVIICGDCNCLLQEKAHKKDLGQDWLEGYCRWCGESND
LVSCKLCKSLFCTKCLKKNLGVELVPEAQASSWHCCCCHPNLLQRLSLQLEKATGSADIM
VSSSGSDSDNSDDSDDSDEDVSATISSKRRQKKNIRRILDDAELGEETKRKIAIEKERQE
RLKSLRGQFSASSVEMSSDGCNGNLPEGATVEVLGDALAGYIVNVVREKGEEAVRIPPSI
SAKLKAHQIAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCV
ELGLRTALIVTPVNVLHNWRQEFLKWRPSELKPLRVFMLEDVSRDRRAELLAKWRSKGGV
FLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTKADVTQALKQVK
CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLIDVKI
MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTTQ
VHPEMLRKRCFFAGYQALARIWNHPGILQLTKEVKDYVKHEDAVENFLVDDSSSDENSDF
NVLAGEKMKYANDLLQRKDDNGFFLKGWWNDLLHGKIYKELDHSGKMVLLMEILTMSSDV
GDKVLVFSQSIPTLDLIELYLSRIPRRGKRGKFWKKGKDWYRLDGRTESSERQKLVERFN
EPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRSWRYGQTKPVFAY
RLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDDNPETLADLS
QENGHQDNPILVGHSLKHTVPHSNGSSYSDKLMETLLSKHHPRWIANYHLHESLLQENEE
EKLSKEEQDMAWEVYRKSLEWEEVQRVPLGESIMPEQKPEMPNAVPPVSETRSTLPSKLS
RRFATRKCTNLAHLLTLRSQGTKFGCSTVCGECAQEIRWEDLKKS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaaactgaggatgaagtggtggatattgagagcgcttccagtggttctttc
aatgatgattcagatgacgaggaatccttagttcctgaagtagatgatgacgtgcatctt
gaggagccattaactgaagaggaaatacaagatcttatttctgagttgttagaagtggag
agtaaggctgcagaggctcaagaagctcttgaagaggagtctctttctaaagtggagagt
gaagttagacaagaattgaagcaaaatcttcagggtgatgatctggaaactgccgttgct
gatgagatgactacttttaaagaagagtgggaagctgttctagatgaccttgaaaccgaa
agtgctcacttactggaacaacttgatggggctggcattgaactccctagcctttataag
atgattgaaagagaagctcccaatgtttgctccactgaagcatggaaaaagaggaatcat
tgggttgggtctctggcaactgctgaaattgctatgtcaattgctgatgctgagaaacat
ctacaagtaaacagacctgttagaaggcgacatggtaaattactggaagaaggtgctagt
ggctttcttcaaaaaaaactgtgtgacgaatcccaggagccagcaaagaaagaaaccgag
ggcgattgggatctgttcaataaaatagtttctgatgggagtggcaatgatgcttcattt
ggtggtaagcattgggcttctgtttatttggccagcactccacagcaagctgccttgatg
ggactcaaatttcctggagttgatgaggtggaggagattgatgatgttgatgggaattct
atggatccatttattgcagctgccattgcaaatgaaagagaattagatctctctgaagag
caaaggagaaaatttaaaaaggtcaaagaagaggatgatgcagttgttgataggaaactt
caaatccgtttgaaacataggaggcatcaaaagaaaagtaaacagcgagaaataagcaca
cctatcctgatgatggagagccacatgcagaagtcttatggtttaaaccctgttttgaag
gatggaaccagtgatgaggggaaaattgtgtctgacaatggcaaggatacatgtgtgctt
atggagaccaataaaattgaaggttttgatgccagtcatcatgttgacaaagaaaagcct
atgagtactgatgatttgttagatccacccaaatcttcatcagatgacattattgaacag
agaggaatcaaacgtgtaaacagtggtgggtttgatgctgataataagaagtgtcggatt
gttattattgacagtgataatgaagcagacgtcactgaagagaaattagattgcaatact
caagaggtaaaagaagatttatgtaacaatggtgctgattctcttccttcagagcgttta
gatgaaaaattttggtgcacagtttgtgataaagtggctcttgaagtacatccacaccct
ttcttgaaagtgattatttgtggagattgcaattgcttattgcaggaaaaggcacataaa
aaggatctgggacaagattggttggagggttactgtagatggtgtggagaaagcaatgac
ttagttagctgtaaattatgcaagagtttattctgcaccaaatgtttaaagaagaatctc
ggtgtagaattggttcccgaagctcaggcatctagctggcattgttgttgttgccatcca
aatcttttgcaaagactgtccttgcaattagagaaagctacggggtctgctgatataatg
gtttccagttctggtagtgattcagataattcagatgattcagatgattctgatgaagat
gttagtgctacaatcagctccaagcgaagacaaaaaaagaatattcggaggatacttgat
gatgctgaattaggagaagagacaaaaaggaaaatagcaattgaaaaggaacgtcaggaa
cgcctgaagtctttgcgagggcagttttctgcctcgtcagttgagatgagctctgacggc
tgtaatgggaatttaccagaaggtgcaactgttgaagttcttggtgatgcactagcaggt
tacatagtgaatgttgtaagggagaaaggtgaagaagctgttagaattcctcctagcatc
tcagctaagctgaaggcccatcagattgctggaataagattcatgtgggaaaatataata
cagtcaatcagaaaagtgaagtctggggataaaggtcttggatgtattctagctcatact
atgggccttggtaaaacttttcaggtgatagcttttttgtacactgcaatgagatgtgtt
gaattggggttaagaactgcgcttatagtcacacctgtcaacgtgctacataattggcgg
caggagttcctcaagtggagaccttctgagttaaagccactcagagtcttcatgctggaa
gatgtatctagagatagaagggcagaattgcttgctaaatggagatctaaaggtggtgtc
tttttgattggctatactgcttttcgaaatttgtcttttgggaagcatgtgaaagatcgg
aacatggccagggaaatttgccatgctttgcaggatggacctgacattcttgtttgtgat
gaagcccatatgataaaaaatactaaggctgatgttactcaagccttgaaacaagtaaaa
tgccagagaagaattgcacttactggatcacctcttcaaaacaatctcatggaatattac
tgtatggttgattttgtaagagaaggttttcttggaagcagccatgaatttcggaaccgc
ttccaaaatcctatagagaacggacaacacaccaattcaactctgattgatgtgaaaatt
atgaaccaaaggtctcatatcctctatgaacagttaaaaggctttgttcaaagaatggac
atgaatgtcgtgaagaaggatctaccacccaaaactgtctttgtgataactgtcaagctt
tctcccttacagagaaaattgtacaagagattccttgatgtgcatgggttcactacccag
gtgcatcctgaaatgttaaggaagagatgtttttttgccgggtaccaggcattagctcgg
atatggaaccaccctgggatcttgcagctgacaaaagaagtcaaggactacgtaaagcat
gaagatgctgttgagaattttcttgtggatgatagttccagtgatgaaaattctgatttt
aatgtgcttgctggagagaagatgaagtatgcaaatgacttgctgcaaaggaaagatgat
aatggctttttcctgaagggttggtggaatgatcttcttcacggaaaaatttataaagag
cttgatcacagtggcaaaatggttttactgatggagattctaaccatgagttctgatgtg
ggtgacaaggttttagtttttagtcagagcataccaaccctagatctcattgaactttat
ctctcaagaatacctcgacgtggcaaacgagggaagttttggaagaagggaaaagattgg
tataggttggatggaaggacagagagttctgagaggcagaagcttgttgagagatttaat
gagcctttgaataagagggtaaagtgcactctgatttcaaccagagcaggctctttgggt
attaatcttcatgcagcaaatcgtgttgttatagttgatggttcttggaatccaacatat
gatctccaggctatctatcgatcatggaggtatggacagacaaagcctgtgtttgcttat
cgattgctggctcatggaactatggaagagaagatatataagcgccaggtaacaaaggag
gggcttgctgctagggtggttgatagacaacaggtacataggactatttctaaagaagaa
atgctgcatctctttgagtttggtgatgatgacaaccctgagactttggctgatctaagt
caagaaaatgggcatcaagacaacccaattttggttggacattcactgaaacacacagta
ccacattcaaatggaagtagttattctgataagttaatggaaaccttacttagcaagcat
catccgaggtggattgccaattatcatttacatgaatctctgttacaagaaaatgaagag
gaaaaactatcaaaagaggagcaggatatggcatgggaggtttatcggaaatcgctggaa
tgggaagaagtgcagagggtaccactcggtgagtctattatgcctgaacaaaagccagaa
atgccaaatgcagtgccccccgtatcagaaactcgcagcactttgccaagtaaactaagc
agacgtttcgcgacgcggaaatgcaccaaccttgcgcacttgttgacacttagaagccag
ggaacaaaattcggttgcagtactgtctgtggggaatgtgcccaggagatacggtgggaa
gacttgaagaagagttag
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