Cajanus cajan (pigeon pea): 109807417
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Entry
109807417 CDS
T04868
Name
(RefSeq) uncharacterized protein LOC109807417
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109807417
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109807417
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GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
109807417
NCBI-ProteinID:
XP_020225520
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All DBs
Position
11:48303439..48305847
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AA seq
461 aa
AA seq
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MGPSSSSSSSPKWSCKACTFLNPYNNPSCQVCGTRCLSNLKDLDDATEHDSSVGSVFFPL
RPCNKRKAINDHDSSERVNLCLSPASPMGPSSSSSSSPKWSCKACTFLNPYNNPSCQVCG
TRCLSNLKDLDDATEHDSSVGSVFFPLRPCNKRKAIDHHDSSERVNLKLKLSQKATDITG
DEDTDSGKDFSSFKILSYNVWFREDLELHKRMKAIGDLVQLHSPDLICFQEVTPNIYDIF
KQSTWWGVYRCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGRELCIADVEAASG
KSLVVATSHLESPCPAPPKWDQMYSKERVVQANEAINLLKKQPNVVFGGDMNWDDKHDGP
YPLQDGWIDAWSQLRPNENGWTYDTKSNQMLTGNRTLQKRLDRFICHFHDFKIASVDMVG
MEAIPGVLYNKEKKVRKEVKQLVLPVLPSDHYGLLLTISSK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggtccttcttcttcgtcttcgtcatccccaaaatggtcgtgcaaggcctgcactttc
ttaaacccttacaacaacccctcttgccaggtttgcggcactcgctgcctctccaatctc
aaagacttggatgacgctactgaacacgattcttctgttggctctgttttcttccctctt
cgaccctgcaacaagagaaaggccatcaacgaccacgattcttctgagagggtcaatctc
tgcctgtcccctgcatccccaatgggtccttcttcttcgtcttcgtcatccccaaaatgg
tcgtgcaaggcctgcactttcttaaacccttacaacaacccctcttgccaggtttgcggc
actcgctgcctctccaatctcaaagacttggacgacgctactgaacacgattcttctgtt
ggctctgttttcttccctcttcgaccctgcaacaagagaaaggccatcgaccaccacgat
tcttctgagagggtcaatctgaagctcaagctatcccaaaaggctaccgatatcaccggt
gatgaggatactgattcaggaaaagattttagttcgtttaagatattgagttacaatgtt
tggttccgggaagacttggagttgcacaagaggatgaaggctattggcgaccttgttcaa
ttgcattcgcctgatttaatttgtttccaggaagttactcccaatatatatgacattttc
aagcaatccacatggtggggtgtatatcgttgttctgtttcttctgagatggcttattca
agaccctacttttgtatgctgttaagcaaattgcctgtgaaatctttcagcaataagccc
ttcagcaattctataatgggaagagaactttgcattgctgacgttgaagctgcaagtggc
aagtcattagtggttgccactagccatcttgagagtccctgtccagcccctccaaaatgg
gatcaaatgtacagcaaggaaagagtagtgcaggccaatgaggctataaatcttcttaag
aaacagccaaatgttgtttttggaggtgacatgaattgggatgacaaacatgatggtcca
tatcctttacaagatggatggattgatgcctggtctcagctaaggccaaatgaaaatggt
tggacttatgacaccaaatcaaaccagatgttgacaggcaaccgtactctccaaaagcga
ttagatcgctttatatgccatttccatgattttaagatagctagtgttgacatggttggg
atggaagcaatacctggtgttttatacaacaaagagaagaaagtaagaaaagaggtgaaa
caactggtactccctgttttacccagtgatcattatggcctgcttttgacaatttctagc
aagtaa
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