Cajanus cajan (pigeon pea): 109807426
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Entry
109807426 CDS
T04868
Name
(RefSeq) actin-interacting protein 1-2 isoform X1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccaj04990
]
109807426
Domain-containing proteins not elsewhere classified [BR:
ccaj04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
109807426
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
eIF2A
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_NWD2_C
KNTC1_N
DUF5711
Motif
Other DBs
NCBI-GeneID:
109807426
NCBI-ProteinID:
XP_020225533
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All DBs
Position
2:35327611..35334580
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AA seq
609 aa
AA seq
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MAKLSETYACAPSTERGRGILISGDSKSNNILYCTARSVIIRNLDNPLQISVYGEHAYPV
TVARYSPNGEWIASADVSGTIRIWGTHNDFVLKNEFRVLSGRIDDLQWSLDGMRIVACGD
GKGKSFVRAFMWDSGSTVGDFDGHSRRVLSCSFKPTRPFRIVTCGEDFLANFYEGPPFKF
SMSIRDHSNFVNCVRFSPDGTKFITVSSDRKGIVYDGKTGNKLGELSSEDGHKGSIYAVS
WSPDSKQVVTVSADKSAKIWDILDDGSGKVNKTLACTESGGVEDMLVGCLWQNDFVLTVS
LGGTIYLYSAKDLDKSPVSLSGHMKNVTVLTLLNRREKMLLSSSYDGVIIRWIPGMGYSG
KFDSKQFGLIKLLLAGKDEVIAAGFDNKVFRVPLQGDNFGPADTVDVGSQPKDVSLALNS
PELAIIAIESGIVLLNGSKVVSTINLGFTVSAATISPDGSEAIVGGQDGKLRIYSVSGDT
VKEVSVLEKHRGAITAIRYSPDVSMFASADMNREAVVWDRVSKEVKVNNMLFNTARINCL
AWSPDSTLVATGSLDTCVIIYEVGKPASSRRTIKGAHLGGVYGLVFIDQERVASSGEDSC
VRVWNLISE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaactctcagagacgtacgcctgcgcaccctccaccgagcgaggccgcggcatc
ctcatctccggcgactccaaatccaacaacattctctactgcacggcccgctccgtcatc
atccgcaacctcgacaatcccctccagatctccgtctacggagagcacgcctaccccgtc
acggtggcgcgctactcccccaacggcgagtggatcgcctccgcggacgtctccggcacc
atccgcatatgggggacccacaacgatttcgttctcaagaacgagtttcgtgtcctctcc
ggtcggatcgatgacctgcaatggtccctcgacgggatgcggatcgttgcctgtggggat
ggcaagggcaagtccttcgttcgcgcctttatgtgggattcgggttccactgttggtgat
tttgatggccattcgcggcgggttttaagctgttcatttaagccaacaagaccattccgc
attgtcacatgtggagaagattttttggcgaatttttatgaaggtccaccgttcaaattc
agtatgtccatcagggaccattcgaattttgtcaactgtgttagattttcaccagatggg
accaaatttattactgttagctcagacaggaagggcattgtatatgatggaaagacagga
aacaaacttggtgagttgtcctcggaggatggtcacaaaggcagcatatatgcagttagt
tggagtcctgacagcaaacaggttgttactgtgtctgctgacaaatctgcgaaaatatgg
gatattcttgacgatggtagtggaaaagtaaataagactttggcatgtaccgaatctggc
ggagtagaggacatgcttgttggttgtctttggcagaatgattttgtgcttactgtctct
cttggtggcacgatctatttatattctgctaaggatttagataaaagcccagtgtcatta
tctggtcacatgaagaatgtaaccgttttgacgctgctcaacagaagggaaaaaatgctt
ttgtctagcagctatgatggagtgatcattagatggattccaggcatgggatacagtggt
aagtttgacagtaaacaatttggattaatcaaattgttactagctggcaaagatgaagtt
attgctgctggatttgacaacaaggtattcagagttcctcttcaaggggataattttggc
cctgctgacactgttgatgttggaagtcaacctaaggatgtgagccttgcactcaatagc
cctgaacttgctatcattgcaattgaatccggaattgtcttactaaatggttctaaagtt
gtttccactataaacctgggctttactgtgagcgccgcaactatttcacctgatggtagt
gaagcgattgtgggagggcaagatggtaagttgcgcatatattcagtctcaggagataca
gttaaagaagtgagtgtccttgagaagcatcgaggtgccatcactgcaatcagatactct
ccagacgtttccatgtttgcatcagctgatatgaatcgtgaagctgttgtatgggaccgt
gtttccaaagaggtgaaggttaataacatgttatttaacactgcacgtattaactgccta
gcttggtcacctgatagcactctggtagctactggttcattggatacatgtgtcatcata
tatgaagttggaaagccagcatcaagccgcagaaccattaaaggtgcccatctaggtggg
gtatatgggttggtttttattgatcaggaaagggtggccagttcaggagaggatagttgt
gttcgtgtttggaatttgatttctgaataa
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