Cajanus cajan (pigeon pea): 109807442
Help
Entry
109807442 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109807442
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109807442
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109807442
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109807442
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109807442
03009 Ribosome biogenesis [BR:
ccaj03009
]
109807442
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109807442
04131 Membrane trafficking [BR:
ccaj04131
]
109807442
03051 Proteasome [BR:
ccaj03051
]
109807442
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109807442
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109807442
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109807442
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109807442
Complex C
Prp19-CDC5 complex
109807442
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109807442
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109807442
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109807442
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109807442
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109807442
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109807442
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109807442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DUF357
DDR
RNB
Motif
Other DBs
NCBI-GeneID:
109807442
NCBI-ProteinID:
XP_020225546
LinkDB
All DBs
Position
11:793457..795962
Genome browser
AA seq
616 aa
AA seq
DB search
MAKEEQKFAVGIDLGTTYSCVAVWQEQHSRVNIIHNEQGNRTTPSFVAFTDNQRLIGDAA
KNQAVTNPENTVFDAKRLIGRKYSDSIIQKEKMLWPFKVVAGVSDKPMIVVKYKGQEKHL
CAEEVSSMILTKMRGIAEAYLEAHVNDVVVTVPAYFNDSQRKATKDACVIAGLSVMRIIN
EPTAAAIAYGLDKRNNCVGERNIFIFDLGGGTFDVSLLTIKDKVFHVKATAGNTHLGGED
FDNRMVNYFVEEFKKKEKVDISGNARALRRLRTACERAKRTLSYEVSTNIELDVLFKGID
FCSSITRGKFERINMGLFEECMETVDKCLTYAKMDKRRVHDVVLVGGSSRIPKVQELLQE
FFDGKDLCTSINPDEAVAYGAAIQAALLSEGIKNVPNLVLLDCTSLSLGISTNVGVMSVV
IPRNTTIPVRKTVEYYTTKDNQHEVPINIYEGERTRAKDNNLLGSFVLSGFPPALRGHPM
DICFSVDANGILTVSAEEKTTGNKNEITIINDKERLSTEEVGRLIQEAEKYLAEDKKFLR
KANAMNSLDDYVYKMQKALKKKVINSKLCLQEKNKISSAITKATSLLDDDSNEIEVLENC
LKELTSLFETFMNKIS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaagaacagaaatttgcagtaggcatcgaccttggtacaacgtattcttgc
gttgcagtgtggcaggagcaacatagtagagtaaacataatacacaacgagcaaggcaac
agaaccacaccttcctttgttgctttcacagataatcagaggttgattggtgatgctgct
aaaaaccaggctgtcaccaacccagaaaacaccgtctttgatgctaaaaggttaattggt
aggaaatatagtgattccattattcagaaagagaaaatgttgtggccattcaaagtcgtt
gctggtgtgagtgacaaacccatgatcgtggtcaagtataagggtcaagagaaacatctc
tgtgctgaagaagtatcgtctatgatcctcacaaagatgcgggggattgcggaggcctac
ttggaagcacatgtaaatgatgttgttgttactgttcctgcttatttcaatgattctcag
cgaaaagccacaaaagatgcatgtgttattgctggcctaagtgttatgcggataatcaat
gaacccactgctgcagctattgcatatggccttgacaagaggaataattgtgttggagag
cgaaacattttcatttttgaccttggtggtggtacttttgatgtatctctcctcacaatc
aaagataaggtcttccatgtcaaggctactgccggaaacactcatctcggcggagaggac
tttgacaacagaatggtgaactactttgtagaggagtttaaaaagaaggagaaagtggac
attagtgggaacgcaagagccctaaggaggttgagaactgcatgtgagagggcaaaaagg
acactatcgtatgaggtttctaccaacattgagttagatgttttatttaagggcattgac
ttctgctcttcaatcactcgtggaaagtttgagcgaatcaatatggggctctttgaagag
tgtatggagacagtagataagtgtctcacttatgctaagatggacaagagaagggtgcat
gatgttgtccttgttggtggttcgtcaaggattcccaaagtgcaggagctattgcaggaa
ttttttgacggaaaggatctctgcactagcatcaaccctgacgaggctgttgcttatggt
gcagccattcaggctgctttgttgagtgaaggcattaagaatgttccaaacttggtgctt
ttggattgcacatcactatcccttggtatatccacaaatgtaggtgtcatgagtgtagtg
attcctaggaacactaccattcctgtaaggaagaccgtagaatactatacaacaaaagat
aaccaacatgaagtcccaattaatatttatgagggcgagagaacaagagcaaaggataac
aatttgctaggttcttttgttctttctggttttcctcctgctcttcgtggccatcctatg
gatatttgtttctctgtagatgcaaatggtatcctaaccgtttctgccgaggaaaaaacc
accggcaacaagaatgagattaccataattaatgacaaagaaaggctgtcaactgaagaa
gtaggaagattgattcaagaagctgagaagtacttggctgaggataagaagttccttaga
aaggccaatgcaatgaattctctggatgattatgtttataagatgcagaaggctctaaag
aagaaagttatcaattcaaagctttgcttacaagaaaaaaataagattagttctgcaatt
actaaggccacaagtttgctagatgatgatagcaatgaaattgaggtgttggagaattgt
ctaaaggagcttaccagcctctttgaaaccttcatgaacaagattagttaa
DBGET
integrated database retrieval system
