Cajanus cajan (pigeon pea): 109807570
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Entry
109807570 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109807570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109807570
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109807570
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109807570
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109807570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
109807570
NCBI-ProteinID:
XP_020225706
LinkDB
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Position
2:27134001..27143090
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AA seq
1005 aa
AA seq
DB search
MFGSTNPFGQSSSSSPFGSQSVFGQTNSSSNPFAPKPFGSTSPFGSQTGSSMFGGTSTGV
FGAAQQSSPFSSNTAFGASSSPAFGSSVPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGG
FGSTTQTSPFGATQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGATSTPAFGATST
PAFGASSTPAFGATSTPAFGSTSSPTFGSTGSAFGVSSSPVFGGGGAFGASSNPMFGSSS
TSAFGSSSSPFGASSTPAFGASSTPSFSFGSAQAFGQSSSAFGSSSPFGSTASPFGGQSS
AFGSQTPTSTFGNTGIGQSGFGGQRGGSRVANYTATTEADSGTSGQTAKLESISAMPIYK
DKSHEELRWEDYQLGDKGGPLPSAQSTGLTGFSSSTTQTNAFSPSPVFGQSSANPFSTTT
PNSNPFAPKSSPFSSGFGTSAAPAFSSSAFGSSTSAAAPSIFGSSPSPFGANSAFGQSTS
LFNTAPAQASSSPFGTSIFGNTQSSQLFSSAAPTIAPTGSTFGQNTSPFGQTTPFSQSSL
FNSPSSGLVGSIFSSSASLTSNNLTGFGQTAPSISTPFQPAQPAQSSGAFGFSNFGQTQP
VGASSFGGTPGIFGQNNFGLQSNTQSSVAVQAVPNTNPFGTLPALPQMSIGRVGTTPSIQ
YGISSMPALDKPAPVRISSLLTSRHLSQRRIRLPVRRYHSKNDGPKVPFFSDDEDTPSTP
KADALFIPRENPRALIICPMEQWPGKAFEKASTFKDRSIPVNENGNISKEACETPDRTSS
QDKDREKSAVENGFVKEQAQTTTIKQASNGSNEDHSPQKADMYKTLSGHRAGEAAIVYEH
GADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGETDV
RGLDLEALIQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGHQYTEGPKI
EKYKEMLKRKAEDQGAEFVSYDPAKGEWKIRVNHFSVYKLVDEDS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtcaacaaacccgtttgggcagtcatcatcatcaagcccttttggctctcaa
tcagtttttggacagactaattcaagtagcaatccttttgcccccaagccatttggtagt
acatctccatttggttcgcaaacgggaagttccatgtttggaggtacttccacaggagta
tttggcgcagcgcaacagtcttctccattttcttccaatacagcttttggtgcttcatca
tcaccagcttttggtagttcggttcctgcttttgggtcatcttcaactcctgcatttggt
agttcatcgtcatcatttggcggatcatcagtttttggtcagaagcctgcttttggaggc
tttggatctactactcaaacaagtccatttggtgctacccagccatcacaaccagcgttt
ggaagcagcatatttggctcctcaacaccttttggtgcttcatctcagccagcatttggt
gctacgagcactcctgcatttggtgcaacaagcactcctgcatttggtgcaacaagcact
cctgcttttggtgcatcaagcacccctgcatttggtgctactagcacccctgcctttggc
tcgacctctagccctacatttggtagcacaggtagtgcatttggggtatcaagttctcct
gtatttggtggtgggggagcatttggagcttcgagtaaccccatgtttggttcatcaagt
acatctgcatttggcagttcaagctctccatttggggcctctagtactcctgcttttggg
gcctctagtaccccatcgtttagttttggatctgctcaagcttttggtcagtcttcttct
gcatttggtagtagcagcccttttggaagtacagcctcaccctttggaggtcagagttct
gcgtttggatcccaaactccgacatcgacttttggaaatactggtattgggcagtcaggt
tttggaggtcaacggggtggaagtagagtagctaattacacagcaacaactgaagcagat
agtggtacctctggacaaactgcaaaattggagtccatttctgccatgcctatttacaaa
gataaaagccacgaggagctaagatgggaggactatcaattgggggataaaggtggacca
cttccctctgctcagtcaactggcttgacaggcttcagttcatctacaacacagacaaat
gccttttctccttcaccggtgtttggtcaatcatcagccaatcctttctctacgacaaca
cctaattctaacccctttgcaccaaagagttcacctttttcttctggatttggaacttct
gctgctcctgccttcagttcatcggcttttggttcttcaacatcagcagcagcaccttca
atatttggctcatccccatctccatttggagccaactctgcgtttggtcaatctacgtcc
ctgtttaatactgctcctgctcaggcttcatcttcaccatttggcacgagcatttttggc
aacacacagtcatcccaattgtttagttctgcagctcctacaattgcaccgacgggttct
acttttggacagaatacctccccctttgggcagactacaccttttagtcaatcaagcttg
ttcaattcaccttcttctgggcttgttggaagcattttctcatcaagtgcatcgctcact
tcgaataatctgactggttttggtcagacagcgccatcaatttcaacacctttccaacct
gcacaacctgctcagtcgagtggtgcctttggctttagcaactttggccagacacaacct
gttggtgcaagcagctttggtggcactccaggcatatttggtcagaataattttggactt
cagtctaatacccagagttctgtggctgtacaagcagttccgaatacaaatccatttgga
acacttcctgcgttgcctcagatgtcaattggtcgagttggaaccactccttcaattcaa
tatggaatctctagcatgcctgccctagacaaacctgctcctgttagaatatcatcttta
ttgacatctcggcatctctcacaaagacgaatcaggcttcctgtcaggagatatcattct
aagaatgatggtccaaaggttccattctttagtgatgatgaggatactccatctacaccc
aaggctgatgctctgttcattcctagagaaaatccaagggcattgatcatttgtcccatg
gagcagtggccaggaaaagcttttgagaaggcatcaacttttaaggatagatccatccca
gtgaatgagaatggaaatatctctaaagaggcatgtgaaacgcctgataggaccagctca
caggataaagatagagagaagagtgcagtagaaaatggatttgtcaaggagcaagctcag
actacaacgataaagcaagcatccaatgggagtaatgaagatcattctccacaaaaggcg
gacatgtacaagacactgagtggtcacagagctggtgaggctgccattgtatatgaacat
ggagctgatgttgaggcactaatgccaaaactgcggcggtctgattactacacactacct
cgaatacatgaactggcagcgaaggaaagagctgaaccaggattctgcagtcatgttaag
gactttgtggttggaaggcaaggttatggaagtatcagatttttgggtgagacagatgta
cgagggcttgatcttgaggccctcattcagtttaacaatcgggaggtgatcgtatacatg
gatgattcaaagaaacctcctgttggacaagggctgaataaacctgctgaggttacactg
ctcaacataaaatgttttgacaaaaaaactggacatcagtatacagaagggccaaaaata
gagaaatacaaggagatgctcaagagaaaggccgaggaccaaggtgctgaatttgtatca
tatgatcctgctaaaggagagtggaagatcagggtcaaccacttcagcgtctacaagctg
gttgatgaagacagttga
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