Cajanus cajan (pigeon pea): 109807811
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Entry
109807811 CDS
T04868
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109807811
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
109807811
NCBI-ProteinID:
XP_020226040
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Position
11:41686537..41692010
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AA seq
1123 aa
AA seq
DB search
MSTSRPSQSSSNSGRSRHSARVLAQTTVDAKLHATFEESGSSFDYSSSVRVSGTADGVNQ
PRSDKVTTAYLHHIQRGKMIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDH
PALGIGTDIKTLFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM
AYKFHEDDHGEVIAEITKPGLEPYLGLHYPATDIPQASRFLFTKNKVRMIVDCHAKHVKV
LQDEKLPFDLTLCGSTLRAPHSCHAQYMSNMDSIASLVMAVVVNDNEEDGDTDAVQPQKR
KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCD
MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIRDIALWLSEYHMDS
TGLSTDSLSDAGFPSALSLGDIVCGMAAVRITAKDVVFWFRSHTAAEIRWGGAKHEPGEK
DDGRRMHPRSSFKAFLQVVKSRSLPWKDYEMDAIHSLQLILRNAFKDTESTDIQTNAINT
RLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNIKIAELTGLPVSEAIG
KHLLTLVEDSSTDRVKKMLDLALQGEEEKNVQFEIKTHESKMDSGPISLVVNACASRDLR
ENVVGVCFVAHDITAQKNVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEWNPAM
TKLTGWKREEVMDKMLLGEVFGTQMACCRLKNQEAFVNFGIVINKAMTGSETEKVAFGFF
ARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLNALTY
MKRQIRNPLCGIIFSRKMLEGTDLGTEQKQLLHTSAQCQRQLSKILDDSDLDSIIDGYLD
LEMAEFTLHEVLVASFSQVMTKSNGKSIRIVNDVTEQIVMETLYGDSLRLQQVLADFLLI
SINFTPNGGQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEALLNQMFGNNGLESEE
GISLLISRKLLKLMNGDVRYLREAGKSAFILSAELAAAHNLKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcaaggcctagccaatcgtccagcaattcagggagatcaagacatagtgcc
agggttcttgctcagacaactgtagatgcaaaactccatgcaacttttgaggagtctggt
agttcctttgactactccagttcagtgcgtgtgtctggtacagctgatggagtcaatcaa
ccgaggtctgacaaagttacaacggcttacctccatcacatacaaagaggcaagatgatt
cagccttttgggtgtttgctggctttagatgagaaaacatgtaaggtcattgcatacagt
gagaatgcacctgaaatgctgaccatggtgagtcatgctgtccccagtgttggtgaccac
cctgcccttggcattggcactgacataaaaactctcttcactgcaccaagtgcttctgca
ttgcagaaggctctagggtttgcggaggtttcgcttcttaaccccatccttgttcattgc
aagacctctgggaagcccttttatgcaattatccaccgtgttactggtagtttgatcatt
gattttgagcccgtcaagccttatgaagttcccatgactgcagcaggtgccttgcagtct
tacaagcttgctgccaaggcaattacccggttgcaatccttgcccagtgggagcatcgaa
agactatgtgataccatggttcaagaagtttttgagctcacaggttatgacagggtgatg
gcttataaatttcacgaggatgatcatggggaggtgattgctgagataacaaagcctggc
cttgagccatatctgggtttgcactatccagccactgatattccccaggcctctcgcttt
ttgtttacaaagaacaaggtccgtatgatagttgattgtcatgcaaaacatgtgaaggtt
cttcaagatgaaaaactcccatttgatttgactttgtgtggttccaccttgagggctcct
catagttgccacgcacaatacatgtcaaatatggactcaattgcttccctggttatggca
gttgtagtcaatgacaatgaagaagatggggacactgatgctgttcagccacaaaagaga
aagagactttggggtttggtagtctgccataacactactcccaggtttgttccctttcct
ctaaggtatgcttgtgaatttctggctcaagtgtttgccatccatgtgaacaaagaaata
gagttagaatatcagattattgagaaaaatatcctgcgcacccagacactcttgtgtgat
atgctgatgcgagatgcacccctaggaattgtatcacagagccctaatataatggatcta
gtgaaatgtgatggagctgccctcttgtataagaacaaggtgtggagattaggagtgaca
ccaagtgaatctcagataagagacatagctttgtggttgtctgagtaccatatggattcc
acaggcttgagtacagatagcttgtctgatgcaggcttcccatcggctctttctcttggt
gatattgtgtgtggaatggcagctgttagaataactgcgaaagatgttgtattttggttt
cggtcacacactgctgcagaaatccgatggggtggtgcaaagcatgaacctggtgaaaaa
gatgatggtaggaggatgcatccaagatcatcattcaaggctttccttcaagttgtgaag
tcaaggagcttaccatggaaggactatgaaatggatgctattcattccttgcagttaata
ctgagaaatgcattcaaagacactgagagtacagatatacagacaaatgctattaataca
agactaagcgatttgaagatagaagggatgcaggaactggaagcagtaacaagtgagatg
gttaggttgatagaaacagcaacagtgcctattttggcagttgatgttgatgggctagtc
aatggatggaacataaaaattgctgagttgacaggtcttcctgttagtgaagctattgga
aagcatttactcacacttgttgaggattcttcaactgatagagtcaagaagatgcttgat
ttggcactgcaaggtgaagaagagaagaatgtccaatttgagatcaaaacgcacgagtct
aagatggattctggtcccattagtttagtagtaaacgcttgtgcaagtagggatcttcga
gagaatgttgtcggggtttgttttgtggcccatgatataactgctcagaagaatgtcatg
gacaaattcacccgtattgaaggtgattacaaggcaattgtacagaaccgcaatccatta
atccctcctatatttggcacagatgaatttggctggtgttgtgagtggaatccagctatg
acaaagttaactggatggaaacgagaggaggtgatggataaaatgcttttgggagaggtt
tttggcacccagatggcttgttgtcgtctaaaaaatcaagaagcttttgttaattttggc
attgtaatcaataaagccatgactggttcagaaacagagaaggttgcttttggtttcttt
gctcggaatggcaagtatgtagaatgcctgctttctgtgagtaagaaattggatgtagag
ggcctagttactggggtcttctgcttcttacagctagctagtccagagctacaacaagca
ttacatattcagcgcctatctgagcaaactgccttgaagagattgaatgcattaacttac
atgaaaaggcagatcaggaatcctttatgcggaattatattttcccggaaaatgttggag
ggtactgacttgggaacagaacagaaacaacttctgcacactagtgctcagtgccagcgg
cagcttagcaaaattcttgatgactcagaccttgacagcatcatagatggttacttggat
cttgagatggctgaattcactctgcatgaagtcctggttgcctccttcagtcaagtcatg
acaaaaagtaatggaaagagtatccgaatagtcaatgatgttacagagcagatcgtgatg
gaaacattatatggtgatagtcttaggcttcagcaggtcttggccgactttttacttatt
tccatcaatttcacgccaaatggaggtcaagttgttgtagcaggctctctaaccaaagaa
cagttaggaaaatccgtccatcttgttaaattagagctaagcataacacacggtggcagt
ggggtgccagaagcgttactgaaccaaatgtttggaaataatgggctagaatctgaggag
ggtattagccttctcatcagcagaaagctgctgaagctgatgaatggagatgttcgctat
ctaagggaagcaggaaaatcagcttttatcctctctgctgaacttgctgcagcccataat
ttgaaagcttaa
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