Cajanus cajan (pigeon pea): 109808009
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Entry
109808009 CDS
T04868
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109808009
Transcription machinery [BR:
ccaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
109808009
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
109808009
NCBI-ProteinID:
XP_020226387
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Position
2:842328..851396
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AA seq
514 aa
AA seq
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MGVVTVSTSAARTPLRLNTKLTSHQQALKRPLIVAFKGNKSNKTALVSPQEQIPLPVETA
KKQKHQKRVGKTNESLKRVRAVTTDESSTFTLDVDYNEAAAKLENIYKLSSVSDTCNAED
VDSKIKRVSRRRKKVGDEHDEGNDDNVVRNQNKKAKRLSLDKRIALKKNAKEEVIVPSKK
KRNVKNTIENIDVLIREYSASTDLVSMDWRKMKIPPVLPSSEHAWLFKLMQPMKALFLVK
EDLQALGKEITDGELADATNMSIVQVRKAVEVGRAARNKLIKHNLRLVLFVINKYFQDFA
SGPRFQDLCQAGVKGLIIAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLE
RVRVDIQRAKLDLSFELHRSPTEEEIVERIGISPERYHEVMKASKPILSLHSRHITTQEE
FINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLSISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctacctcagctgctaggactcctctaagattgaatacaaag
ttgaccagccatcagcaggcactgaagcgacccttaatcgtagcttttaaaggaaataaa
tcgaataaaacagctttggtttcacctcaagagcaaattcctctgccggtagaaacagca
aagaaacagaaacaccagaaaagggtagggaaaactaatgagtcactgaagagagtgaga
gctgtcactactgatgaaagctccacattcaccttggatgtggactacaatgaagctgca
gccaaacttgaaaacatatacaaactcagctcggtatcagatacttgtaatgcagaagat
gtagatagtaaaatcaagagagtgtcgcggaggaggaagaaggttggtgatgaacatgat
gagggaaatgatgataatgtggttagaaaccagaataagaaggccaaacggttgagcctt
gataagaggattgcattgaaaaagaatgcaaaggaggaggtaattgttccaagtaagaag
aaaagaaatgttaagaatacaattgagaatattgatgtgcttatcagggaatattcagca
tcaactgatttagttagcatggactggagaaaaatgaaaattccgccagttcttccttct
tcagaacatgcatggttgtttaagttgatgcaacctatgaaggcactcttcctagtgaaa
gaagatttacaggcactcgggaaagaaattacagatggggaactagctgatgcaacaaac
atgagcattgttcaagtaaggaaagctgtagaggttggtcgagctgccagaaacaagctc
ataaagcacaatctccggcttgtattgttcgtgattaacaaatattttcaagattttgca
agtggcccaaggtttcaagatctttgtcaggcaggagttaaaggacttattatagcaatt
gatcgttttgagccaaaaaggagacttcagctatctacatacagtttattttggataaga
cattctattgttcgttccataaccctctcaagcttcacacgtgttccttttggacttgaa
agggttagagtagatattcaaagagcaaaacttgacttatcgtttgagctccataggtca
ccaacagaagaagagatagtagaaagaattgggatctcccctgaaagatatcatgaagta
atgaaggcatcaaaacccattttatcccttcattcaagacatataaccactcaagaggag
tttattaatgggattactgatgtcgatggtgttaatggtgataataggaggcaacttgct
gttctaagacttgctcttgatgatgtgcttgattccctgaagcctaaagagagccttgtg
atcagacaaagatatggacttgatggaaaaggtgatagaacattgggagaaatcgctggg
aacttgagtatttccagggaaatggtaaggaagcatgaagtcaaggctctcatgaagctc
aagcatcctgcacggttggattatcttcgacgttatgttgtataa
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