KEGG   Cajanus cajan (pigeon pea): 109808024
Entry
109808024         CDS       T04868                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 2
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109808024
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccaj01002]
    109808024
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109808024
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109808024
Peptidases and inhibitors [BR:ccaj01002]
 Metallo peptidases
  Family M1
   109808024
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109808024
   Coactivators
    SAGA/TFTC/STAGA complex
     109808024
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     109808024
SSDB
Motif
Pfam: Peptidase_M1 HEAT_2 Peptidase_M1_N zf-HC5HC2H_2 zf-HC5HC2H
Other DBs
NCBI-GeneID: 109808024
NCBI-ProteinID: XP_020226411
LinkDB
Position
11:19734812..19760258
AA seq 1385 aa
MAKPRKAKNSEDTKPENSGALVHHQKLCLSIDMEKRLVHGYTELEIAVPEIGIVGLHAEN
LGIESVWVDGEPTEFEYYPHHQQQLEDDKRFSSVCSPSSAADAAVSVYMSALEKELVPNL
LINCCKPSKTESEQQQEQPVPENGFHSASEPKQNVRTVRIDYWIEKAETGIHFRNNVLHT
DNQIRRARCWFPCIDDNAQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTFVYKL
DVPVAARWISLAVAEFEILPDHQFSLVSHMCSLPNLSKMRNTVEFFHSAFSCYRDYLSVD
FPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRVKLAYALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDNGGAIALSCS
ASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTL
STKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTAL
QTSSASILDINPDTENRDGDTGYPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSK
LAARRFQKPKKGVKHDGSDDNVDVPSIDMRSNTESPLLWIRADPDMEYLAEVHFNQPVQM
WINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSA
SEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRASDKKSP
REAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQF
DSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKALWLVRIEASRALL
DLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQMRDGLNSNDEITSHTLVSM
LNLLEGRMAFNNVFLRHYLFCILQILARRPPTLHGIPRENRTLHMSLTEACNYQKNMFVL
DSESKPVDLPSSTQNLTQNLGPTTDSLRDALDEAPKDQPCEAPTLVHVEALKEVSLEKPK
EVLTEFPQEVPMEAPNEVSKEADTVSNSHERKRPIKIKVKQSSATSRADTDNQVVERSLG
CRNEIDHGASSSVSVDAPQRNFAETLSMSNHNIDEVNSWHDRGSRMTASIGSAKFLSDGD
ELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADARRYASLQTLSVARFDPDGESL
GKEISGRGKEKHKSKEKKRKRESNKGHQDDPEYLERKRLKKEKKRREKEMAKLQSDEAKR
SSIDLSSKKKEEPVVDVARQVKSVEPSGYNSKSGKKIDTKPEPPEGTSGAPKIRIKIKNR
MLNKS
NT seq 4158 nt   +upstreamnt  +downstreamnt
atggccaagcctcgcaaggcgaagaacagcgaagacacgaagcccgaaaactccggtgcc
ctagttcaccaccaaaagctatgcctctccatcgacatggaaaagcgcctagttcacggg
tatactgaattggagattgcggtgccggagattgggatcgtagggttgcacgcggagaac
ttagggattgagagtgtttgggttgatggtgagccaacggagttcgagtattacccgcac
catcagcagcagttggaggatgataagagatttagctccgtgtgttctcctagctctgct
gctgatgctgctgtctcagtgtacatgtccgctctggagaaggaacttgtccccaattta
cttattaattgctgtaaaccttccaagactgagagtgaacaacagcaggagcaacctgtt
cccgagaacgggtttcactccgcgtctgagcccaagcagaatgtgagaactgttcgtatt
gactattggatagagaaagccgagacaggaatccacttcagaaataatgttcttcacact
gataatcagataaggagagcaaggtgttggttcccttgtatagatgacaatgcacaacga
tgttgctatgacctggagttcactgtagcacacaatctcgtggctgttagtacgggaagc
ttgctttatcaggtcttaagcaaggacaatcctcctcggaaaacatttgtgtataaatta
gatgttccagttgctgcaaggtggatatctttggctgttgccgaatttgaaattcttcct
gatcaccaatttagtctcgtatcacatatgtgttcactgcctaatctgtcaaagatgcga
aatacagtggagtttttccacagtgccttcagctgctatagggattatctttcagtagac
ttcccatttgactcatatacgcaagttttcatagagccagagatggcagtgtcatcattg
agtttaggagcctcaatgagtatatttagttctcaagttttgtttgatgagaaggttatt
gaccagactattgatacaagggtaaaacttgcatatgctcttgcaagacagtggtttgga
gtgtatatcactcctgaggcaccaaatgatgagtggctcttggatggacttgctggtttc
ttgacagatttttttattaagaaacatttaggaaataatgaggcacggtaccggagatac
aaggcaaattgtgctgtttgcaaagttgataatggtggagcgatagctttgagctgttca
gcttcctgtaaagatttatatggaactcagtgcattggtttgtatggaaaaataagatca
tggaagtctgtagcagttcttcagatgttggaaaaacaaatgggtcctgaatctttccgt
agaattttgcaaactatagtttctcgggctcaagataaaacacggtccatgaaaactctt
agtactaaggagtttcgacattttgctaataaagtagggaatcttgaacgtccatttctt
aaagatttctttcctcggtgggtcggttcttgtggatgtcctgttttaaggatgggattt
tcctataacaaaaggaagaatatggttgaattggctgtgttgcggggatgtactgcattg
cagacttcaagcgcatccattcttgatattaacccagacacagaaaatcgagatggagat
actggatatcctggtatgatgagcatcagggtgtatgaactggatggtatgtatgaccat
ccaattctacctatggctggagaagcgtggcaactattggaaattcaatgccactcaaag
cttgctgctagacgctttcagaagcccaagaaaggtgtaaaacatgatggctctgatgac
aatgttgatgtgccttccatagatatgcgttcaaataccgagtcccctttattatggatc
agagcagatcctgatatggagtatcttgctgaggttcattttaaccaaccagttcagatg
tggatcaatcaattagagaaggacaaagatgttattgctcaggcacaagcaattgcagcc
cttgaggcatcaccccagctatcattttctattgtaaatgccctaaacaattttctcagt
gactccaaggctttttggagagtacggattgaagcagcttttgcattggcaaattcagca
tcagaggaaactgatttttctggtctactccatttggtgaaattttacaagagtcgaagg
tttgatcctgacattggacttccaaagccaaacgattttcatgattttgctgagtatttt
gttcttgaggctattccacatgctgttgctatggttagagcttctgacaagaaaagccca
agagaggctatcgagtttgttttacagctattgaagtacaatgacaacaacgggaaccct
tattctgatgtcttctggcttgctgcattggtccagtcagttggtgagcttgagtttggg
caacagagtattctcttattgtcatcactcctaaaacgcattgaccgacttctacagttt
gatagtctcatgccaagctacaatggaatcttgactatcagttgtattcggacattgacc
caaattgctttaaagctttcggggttcattcctcttgatcgagtttatgaacttgtaaag
ccttttcgggacttaaaggcattgtggttagtccgaattgaagcaagtagagcactcctt
gatcttgaattccactgcaagggcatggattctgcgctgcttttatttatcaaatacata
gaagaggagcattccttaagagggcagttaaaactggccacccatgttatgaggctatgt
cagatgagggatggattgaattcaaatgacgaaattacaagccatacacttgtctccatg
cttaatttacttgaagggcgtatggcttttaataatgtctttctccggcattacctgttc
tgcatattacaaatacttgcaagaagacccccaactcttcatgggattcccagagaaaat
agaacgttgcatatgagtctcacagaagcttgtaactatcagaagaacatgtttgttctt
gattcagaaagcaaacctgtggatctgccaagttctacccaaaaccttacacaaaatctg
ggcccaacaacagatagtttgagggatgcacttgatgaagctcctaaagaccaaccttgt
gaagctcccacactggtgcatgttgaagctctaaaggaagtttccctagagaaacccaaa
gaggtacttactgaatttccccaggaagtacccatggaagctccaaatgaagtttccaag
gaagccgatactgtatccaatagccatgaaagaaagaggcccattaaaatcaaggtcaaa
caatcttctgccaccagtagggctgatactgataatcaagtggttgaacgatctttaggc
tgtcgtaatgaaatagatcatggagctagcagttcagtttctgtagatgcaccccagagg
aattttgccgagactcttagcatgagtaatcacaatattgacgaagttaattcttggcat
gatcgaggttcgcgcatgactgccagcattggtagtgcaaagtttttaagtgatggtgat
gaattggtcaaagaactccagtgcactgctgattcaagtatagtttattcccagcctcag
ccagaagatccatcatcatccagtattatccaggataacaacatagatgctgatgcgcgg
cgatatgccagtcttcaaactctttcagtagcaagatttgatcctgacggagaatcatta
ggtaaagaaatttctggtcgtgggaaggaaaagcacaaaagcaaagaaaagaaacggaaa
cgggaaagtaataaaggacatcaagatgatccagaatatttggagcgtaaaagattaaag
aaagagaaaaaacgtcgggaaaaagaaatggcaaagctgcagagtgatgaagcgaagaga
tcctccatagacttgtcaagtaagaagaaagaggaacctgtagtggacgttgctagacaa
gtgaaatctgttgaacccagtggatataattctaaatcaggaaaaaagatcgataccaaa
ccagagccacctgaaggcacatctggtgcaccaaaaattcgaattaaaattaaaaaccga
atgctcaataagtcatag

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