Cajanus cajan (pigeon pea): 109808024
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Entry
109808024 CDS
T04868
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109808024
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccaj01002
]
109808024
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109808024
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109808024
Peptidases and inhibitors [BR:
ccaj01002
]
Metallo peptidases
Family M1
109808024
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109808024
Coactivators
SAGA/TFTC/STAGA complex
109808024
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109808024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
109808024
NCBI-ProteinID:
XP_020226411
LinkDB
All DBs
Position
11:19734812..19760258
Genome browser
AA seq
1385 aa
AA seq
DB search
MAKPRKAKNSEDTKPENSGALVHHQKLCLSIDMEKRLVHGYTELEIAVPEIGIVGLHAEN
LGIESVWVDGEPTEFEYYPHHQQQLEDDKRFSSVCSPSSAADAAVSVYMSALEKELVPNL
LINCCKPSKTESEQQQEQPVPENGFHSASEPKQNVRTVRIDYWIEKAETGIHFRNNVLHT
DNQIRRARCWFPCIDDNAQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTFVYKL
DVPVAARWISLAVAEFEILPDHQFSLVSHMCSLPNLSKMRNTVEFFHSAFSCYRDYLSVD
FPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRVKLAYALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDNGGAIALSCS
ASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTL
STKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTAL
QTSSASILDINPDTENRDGDTGYPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSK
LAARRFQKPKKGVKHDGSDDNVDVPSIDMRSNTESPLLWIRADPDMEYLAEVHFNQPVQM
WINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSA
SEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRASDKKSP
REAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQF
DSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKALWLVRIEASRALL
DLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQMRDGLNSNDEITSHTLVSM
LNLLEGRMAFNNVFLRHYLFCILQILARRPPTLHGIPRENRTLHMSLTEACNYQKNMFVL
DSESKPVDLPSSTQNLTQNLGPTTDSLRDALDEAPKDQPCEAPTLVHVEALKEVSLEKPK
EVLTEFPQEVPMEAPNEVSKEADTVSNSHERKRPIKIKVKQSSATSRADTDNQVVERSLG
CRNEIDHGASSSVSVDAPQRNFAETLSMSNHNIDEVNSWHDRGSRMTASIGSAKFLSDGD
ELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADARRYASLQTLSVARFDPDGESL
GKEISGRGKEKHKSKEKKRKRESNKGHQDDPEYLERKRLKKEKKRREKEMAKLQSDEAKR
SSIDLSSKKKEEPVVDVARQVKSVEPSGYNSKSGKKIDTKPEPPEGTSGAPKIRIKIKNR
MLNKS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaaggcgaagaacagcgaagacacgaagcccgaaaactccggtgcc
ctagttcaccaccaaaagctatgcctctccatcgacatggaaaagcgcctagttcacggg
tatactgaattggagattgcggtgccggagattgggatcgtagggttgcacgcggagaac
ttagggattgagagtgtttgggttgatggtgagccaacggagttcgagtattacccgcac
catcagcagcagttggaggatgataagagatttagctccgtgtgttctcctagctctgct
gctgatgctgctgtctcagtgtacatgtccgctctggagaaggaacttgtccccaattta
cttattaattgctgtaaaccttccaagactgagagtgaacaacagcaggagcaacctgtt
cccgagaacgggtttcactccgcgtctgagcccaagcagaatgtgagaactgttcgtatt
gactattggatagagaaagccgagacaggaatccacttcagaaataatgttcttcacact
gataatcagataaggagagcaaggtgttggttcccttgtatagatgacaatgcacaacga
tgttgctatgacctggagttcactgtagcacacaatctcgtggctgttagtacgggaagc
ttgctttatcaggtcttaagcaaggacaatcctcctcggaaaacatttgtgtataaatta
gatgttccagttgctgcaaggtggatatctttggctgttgccgaatttgaaattcttcct
gatcaccaatttagtctcgtatcacatatgtgttcactgcctaatctgtcaaagatgcga
aatacagtggagtttttccacagtgccttcagctgctatagggattatctttcagtagac
ttcccatttgactcatatacgcaagttttcatagagccagagatggcagtgtcatcattg
agtttaggagcctcaatgagtatatttagttctcaagttttgtttgatgagaaggttatt
gaccagactattgatacaagggtaaaacttgcatatgctcttgcaagacagtggtttgga
gtgtatatcactcctgaggcaccaaatgatgagtggctcttggatggacttgctggtttc
ttgacagatttttttattaagaaacatttaggaaataatgaggcacggtaccggagatac
aaggcaaattgtgctgtttgcaaagttgataatggtggagcgatagctttgagctgttca
gcttcctgtaaagatttatatggaactcagtgcattggtttgtatggaaaaataagatca
tggaagtctgtagcagttcttcagatgttggaaaaacaaatgggtcctgaatctttccgt
agaattttgcaaactatagtttctcgggctcaagataaaacacggtccatgaaaactctt
agtactaaggagtttcgacattttgctaataaagtagggaatcttgaacgtccatttctt
aaagatttctttcctcggtgggtcggttcttgtggatgtcctgttttaaggatgggattt
tcctataacaaaaggaagaatatggttgaattggctgtgttgcggggatgtactgcattg
cagacttcaagcgcatccattcttgatattaacccagacacagaaaatcgagatggagat
actggatatcctggtatgatgagcatcagggtgtatgaactggatggtatgtatgaccat
ccaattctacctatggctggagaagcgtggcaactattggaaattcaatgccactcaaag
cttgctgctagacgctttcagaagcccaagaaaggtgtaaaacatgatggctctgatgac
aatgttgatgtgccttccatagatatgcgttcaaataccgagtcccctttattatggatc
agagcagatcctgatatggagtatcttgctgaggttcattttaaccaaccagttcagatg
tggatcaatcaattagagaaggacaaagatgttattgctcaggcacaagcaattgcagcc
cttgaggcatcaccccagctatcattttctattgtaaatgccctaaacaattttctcagt
gactccaaggctttttggagagtacggattgaagcagcttttgcattggcaaattcagca
tcagaggaaactgatttttctggtctactccatttggtgaaattttacaagagtcgaagg
tttgatcctgacattggacttccaaagccaaacgattttcatgattttgctgagtatttt
gttcttgaggctattccacatgctgttgctatggttagagcttctgacaagaaaagccca
agagaggctatcgagtttgttttacagctattgaagtacaatgacaacaacgggaaccct
tattctgatgtcttctggcttgctgcattggtccagtcagttggtgagcttgagtttggg
caacagagtattctcttattgtcatcactcctaaaacgcattgaccgacttctacagttt
gatagtctcatgccaagctacaatggaatcttgactatcagttgtattcggacattgacc
caaattgctttaaagctttcggggttcattcctcttgatcgagtttatgaacttgtaaag
ccttttcgggacttaaaggcattgtggttagtccgaattgaagcaagtagagcactcctt
gatcttgaattccactgcaagggcatggattctgcgctgcttttatttatcaaatacata
gaagaggagcattccttaagagggcagttaaaactggccacccatgttatgaggctatgt
cagatgagggatggattgaattcaaatgacgaaattacaagccatacacttgtctccatg
cttaatttacttgaagggcgtatggcttttaataatgtctttctccggcattacctgttc
tgcatattacaaatacttgcaagaagacccccaactcttcatgggattcccagagaaaat
agaacgttgcatatgagtctcacagaagcttgtaactatcagaagaacatgtttgttctt
gattcagaaagcaaacctgtggatctgccaagttctacccaaaaccttacacaaaatctg
ggcccaacaacagatagtttgagggatgcacttgatgaagctcctaaagaccaaccttgt
gaagctcccacactggtgcatgttgaagctctaaaggaagtttccctagagaaacccaaa
gaggtacttactgaatttccccaggaagtacccatggaagctccaaatgaagtttccaag
gaagccgatactgtatccaatagccatgaaagaaagaggcccattaaaatcaaggtcaaa
caatcttctgccaccagtagggctgatactgataatcaagtggttgaacgatctttaggc
tgtcgtaatgaaatagatcatggagctagcagttcagtttctgtagatgcaccccagagg
aattttgccgagactcttagcatgagtaatcacaatattgacgaagttaattcttggcat
gatcgaggttcgcgcatgactgccagcattggtagtgcaaagtttttaagtgatggtgat
gaattggtcaaagaactccagtgcactgctgattcaagtatagtttattcccagcctcag
ccagaagatccatcatcatccagtattatccaggataacaacatagatgctgatgcgcgg
cgatatgccagtcttcaaactctttcagtagcaagatttgatcctgacggagaatcatta
ggtaaagaaatttctggtcgtgggaaggaaaagcacaaaagcaaagaaaagaaacggaaa
cgggaaagtaataaaggacatcaagatgatccagaatatttggagcgtaaaagattaaag
aaagagaaaaaacgtcgggaaaaagaaatggcaaagctgcagagtgatgaagcgaagaga
tcctccatagacttgtcaagtaagaagaaagaggaacctgtagtggacgttgctagacaa
gtgaaatctgttgaacccagtggatataattctaaatcaggaaaaaagatcgataccaaa
ccagagccacctgaaggcacatctggtgcaccaaaaattcgaattaaaattaaaaaccga
atgctcaataagtcatag
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integrated database retrieval system