Cajanus cajan (pigeon pea): 109808055
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Entry
109808055 CDS
T04868
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109808055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109808055
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
109808055
SWR1 complex
109808055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
109808055
NCBI-ProteinID:
XP_020226463
LinkDB
All DBs
Position
11:complement(1140648..1163650)
Genome browser
AA seq
2043 aa
AA seq
DB search
MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDIKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDAYKPAENNSAEHHMNVQCKDVHGDIINEP
KEANVAEYQSDAADNDEEYDVQSDDESEDDERTIELDEALITKEERQEELAALCDEMDLP
IEELLKRYSGEKGESAMKESSPEHSEDDGKIVRAGDENGDDLLSVSKIGTSNCIMVPGRR
CDESNGDVAIPTNNLPQSEDGQSENLKEVPSETVNEDFAYDFTDGEEDGDFLLGTEDKDD
ETTLSEEEKLERVDAIDPKDEIALLQKESDMPVEELLARYKRDTSDNEDGEHESDYASAL
SEDLSNSPVHEDAGQKDPVVPMDEDIKSGEELAAVQSQEEQWESPHENLETRESEHIIAD
AAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRLNGILADEMG
LGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK
LKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFN
SKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEGEEKVNKEVV
DRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASAN
FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIDVQLSSSVCSILLPSPFSTVDLRGL
GLLFTHLDHSMTAWESDEVQAIETPATLIMERTDIADLEVIRPGLKCQKKLQGTNIFEEI
QRAIWEERLKQAKERAAAIAWWNSLRCKKRPIYSTTLRDLVTLRHPVYDIHQVKANPVSY
LYSSKLADIVLSPVERFQKMTDVVESFMFAIPAARAPTPVCWCSTSETNGFLRPSYKQKC
SEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTK
MLDILEAFINLYGYTYMRLDGSTQPEERQTLMQCFNTNPKFFLFILSTRSGGVGINLVGA
DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAKQKRALDDLV
IQSGGYNTEFFKKLDPMELFSDHRTLSVKNMPKEKNQNNGEVSVTNADVEAALKCVEDEA
DYMALKKVELEEAVDNQEFTEEAIGRLEEDDYVNEDDETAELGESVSNLNKENVVMLNGS
DHKEDRPPHSVAVKEDDADVLADVKQMAAAAAAAGQAISAFENKLRPIDRYAIRFLELWD
PIIDKTALESEVRIEDTEWELDRIEKYKDEMEAEIDEDEEPLVYESWDADFATMAYRQQV
EALAQHQLMEELEYEAKQKEAEEEAYDSKKAHTPGDSKPKSKKKPKKAKFKSLKKGSLNS
GLRLVKEESEAEPMNIDDEDVVGLDFVSPNSTMQKKRKKSKLTTDGEEEKRHKKSKKSKR
DPPDIYASDLESNSLVVLDEHAESKTCDSLVDLEQKTTSRSKMGGKISITPMPVKRIWVI
KPEKLKKGNHWSKDCFPSADIWLPQEDAILCAVVHEYGPNWSLVSETLYGMTAGGLYRGR
YRHPVHCCERFRELFQKYVLLSMDNANHEKINSPGSGKALLKVTEDNIRILLGVASEQVN
RELLLQKHFFALLSSVWKVASHIERRQNQSPACNGLYFDQSFFTSIGQPSQNSLKKSSGR
MTFANLTQSKKLVAAALDDTTTRPENDKVILSIQGEDMPVSTDQLDITLEFPKEECDVLS
SFPSVINLSIPGTEPSPTLNKQTGDGLKVGFSIAENRFREATRVCEEDSSGWASSAFPTN
DARSRPGSRIQSSGKQKSSVSDSAKPSRSKSKRASTDPSEMHHHQADSISQSVSPLKDLR
FDLTSSTADEVGIDGMDGNLLFRLNGESSEEMCSVEMFPHDYDAGLISDLDDCTAFSEFT
DIR
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaaggtcccaggtctaagattgatcacgagagcagagctaaacggcaaaag
gctcttgaagctccaagggagcctcgacgacccaaaactcattgggaccatgtcttagaa
gagatggtgtggttatcaaaggactttgagtctgaaaggaaatggaaattagctcaggca
aagaaagttgctttaagagccagcaaaggcatgttagatcaggctacaagaggtgaaaag
aagatgaaggaagaagagcagcggttaagaaaagttgcacttaatatttctaaggatatt
aagaaattctggacaaaaatagaaaaactggttctttacaagcatcaaatggaacttgat
gagaagaagaaaaaggcactcgacaaacagcttgagtttcttttagggcaaaccgagagg
tactcaacaatgttggcagaaaatcttgtggatgcttataaaccagcagagaataattct
gcagagcatcacatgaatgttcaatgcaaagatgtacatggagatattattaatgaacct
aaggaagctaatgttgccgagtatcaatcagatgcagctgacaatgatgaagaatatgat
gtgcaatcagatgatgaatcggaggatgatgagcgaacaattgagctagatgaggctctt
ataactaaagaagaaagacaagaggaattggcagctttgtgtgatgaaatggatcttcca
attgaggagttactcaagcgttattctggggagaaaggagaatctgcaatgaaagaaagt
agtcctgagcatagtgaagatgatgggaaaattgttagagctggtgatgaaaatggagat
gatcttttatctgtcagcaaaattggcacaagcaactgcatcatggtccctggtcgacgt
tgtgatgaaagtaatggtgatgttgctataccaacaaacaatctacctcagagtgaggat
ggtcaatctgaaaatctcaaagaggttcccagtgagacagtcaatgaagattttgcatat
gattttactgatggagaggaagatggcgactttttgcttggcactgaagataaggatgat
gaaacaactttatctgaggaggaaaaactggaaagagttgatgcaattgatcccaaggat
gagattgcattattacaaaaggagagtgacatgcctgttgaggaactgcttgcaaggtat
aaaagggatacaagtgacaatgaagatggggaacatgaatctgattatgcttctgcttta
tcagaggacctttcgaattctccagtccatgaagatgctgggcagaaggatcctgtggtt
cctatggatgaagatatcaagtctggtgaggaactggctgccgtacagtcccaggaagaa
caatgggaatcacctcatgaaaatttggaaacaagagaaagtgaacatataattgctgat
gcagctgctgctgcaagatcagcacaacccactggaaatactttctccacaacgaatgtg
cgtacaaagtttccctttctactcaagtactctctccgtgagtaccaacatattggtttg
gattggcttgtcacgatgtatgaaaaaagactgaatggaattttggcagatgaaatgggg
cttggaaaaacaattatgactatagctttgcttgcacatcttgcctgtgaaaaagggatt
tggggaccgcatttaattgtggtaccaactagtgtaatgcttaactgggagactgaattt
ctgaaatggtgtcctgcctttaaaattttgacttattttggaagtgcgaaggagcgaaaa
cttaaaagacaaggatggttaaaaccaaactcatttcatgtatgcataacaacttataga
ttagttattcaggactccaaagttttcaagcgcaaaaagtggaaatacttgatcttagat
gaagctcatctcattaaaaactggaagtcacaaaggtggcagacactattgaatttcaat
tcaaaacggcggattctcttgactggtacgccactacagaatgatctcatggaactgtgg
tctctcatgcatttcttaatgcctcatgttttccagtcacatcaagagtttaaggattgg
tttagtaatcctatatcagggatggtagagggagaagaaaaagttaataaggaggttgtt
gatcgcctgcataatgtccttcgtccattcctactccgtcgattaaagcgagatgttgag
aagcaacttccaatgaagcatgaacatgtcatatattgtagactgtcaaagagacagcgg
aatttgtatgaagatttcattgctagctcagagacccaagccacccttgcaagtgccaat
ttttttgggatgattagtattatcatgcaacttcgtaaggtttgcaatcatcctgaccta
tttgagggtcgtcctattgtcagttcttttgatatgtgtggtattgatgttcagttaagt
tcttcagtttgctcaattcttttgcctagtcccttttcaacggtggacctaagaggtttg
ggtcttttattcactcatcttgaccatagcatgactgcttgggaaagtgatgaagtacaa
gctattgagacccctgcgactttaatcatggaacgtactgatatagctgacctagaagta
attaggcctggactgaaatgtcaaaaaaagttgcaaggaacaaacatttttgaagagatc
caaagggcaatctgggaagagaggctaaaacaggcaaaggaacgtgcagcagctattgca
tggtggaactccttgagatgtaaaaaacgacccatctactcaacaacactaagggatctt
gttaccttaagacatcctgtatatgatattcatcaagtgaaagcaaaccctgtttcgtac
ttgtactcatcaaagctagctgacattgttctctcccctgttgaacgatttcaaaagatg
actgatgtggttgaaagtttcatgtttgcaattccagctgcacgagcacctactcctgtt
tgctggtgcagtactagtgagacaaatggatttctgcgcccatcttacaagcagaaatgc
tctgaggttctgttaccattactgtcaccaatcaggcctgcaattgtacgccgccaagtg
tatttccccgataggcggcttatacaatttgactgtgggaaactgcaggaattagcaatt
ttgttgaggaaattaaaatcagaaggtcatcgagccctgatattcacccagatgacaaag
atgcttgacatattagaagctttcattaatttgtatggctatacatacatgcgattagat
gggtcaacccaaccggaggagagacagaccttaatgcagtgctttaacacaaaccccaaa
ttttttcttttcatattgtcaacccgtagtgggggtgttggtatcaatctagttggagct
gacacggttattttttatgatagtgactggaatcctgctatggatcaacaggcacaagat
cggtgccacagaattggtcagacacgggaagttcatatttatagattgattagtgaaagc
accattgaggagaatattttgaagaaagcgaaacagaagcgtgcacttgatgatctagtt
atacaaagtgggggttataataccgagttcttcaagaagctcgatcctatggaactattt
tcagatcatagaacactttcagtaaaaaatatgccaaaggagaaaaaccagaacaatggg
gaagtttctgtaactaatgcagatgtagaggctgcattaaaatgtgtagaagatgaagca
gattatatggcattgaagaaagttgaactggaagaggctgtggacaaccaggagtttaca
gaagaagccattgggagacttgaggaggatgattatgtaaatgaggatgatgagactgct
gagttaggtgaatctgtttcaaacttaaataaagagaatgtggtaatgttaaatggaagt
gatcataaggaagatagaccaccacactctgttgctgtcaaagaagatgatgctgatgtg
ctggctgatgtcaaacagatggctgcagctgcagctgcagctggacaagctatctcagca
tttgagaataagcttcgccctattgatcgctatgccattcgttttctggaactgtgggat
ccaattatagataaaacagccttggaatctgaagtcaggattgaggacacagaatgggag
ttggatcgcattgaaaagtacaaggatgagatggaagccgaaattgatgaagatgaggaa
cctctcgtatatgaaagctgggatgctgattttgcaactatggcatatcgacagcaagta
gaggccttggctcaacatcagttaatggaggaactcgaatatgaagctaaacagaaagaa
gctgaggaagaagcttatgattctaaaaaggctcatacaccaggggattcaaagcccaaa
tctaaaaagaaaccaaagaaggcaaagttcaaatctctaaagaaaggatctttaaattct
ggcttgagacttgtgaaagaagagtcagaagcagagccaatgaacatagatgatgaggat
gtcgttggtctggattttgtgtctccaaattcaaccatgcagaaaaaacgtaagaagtct
aaattaacaactgatggtgaagaagaaaagagacataagaagtccaaaaagtccaagagg
gatcctcctgacatttatgcttctgatttagaatccaactcattagttgtgctggatgaa
catgcagaatcaaaaacttgtgatagtttggttgatttggaacagaaaacaacaagcagg
agtaagatgggaggaaaaatatccatcacccctatgcctgtaaaacggatctgggtgata
aaaccagaaaaattgaaaaaggggaatcattggtccaaagattgttttccatcagctgat
atttggctgcctcaggaggatgcaatattatgtgctgttgttcatgaatacggtcctaac
tggagtttggttagtgagacgctttatggtatgactgctggtggattatacagggggaga
tatcgtcatcctgtccattgctgtgagaggttccgagaactattccaaaagtatgtcttg
ctctcaatggacaatgctaatcatgagaagatcaacagtccaggctctggaaaggctctt
cttaaagttacagaggataacattcggatactcttaggcgttgcttctgagcaggttaat
agggagttgctgctgcagaaacatttttttgcactactttcatctgtctggaaggtggca
tcacatattgagcgcaggcaaaatcaatcacctgcctgtaatggtctctatttcgatcag
agtttctttacttctattggccagccttcacaaaattccttgaagaaatcctctggaagg
atgacatttgcaaatttgacccagagcaagaagttagtagcagctgcacttgatgatacc
acaactaggccagagaatgacaaagtcatcctctctatccaaggggaagacatgccagtg
agcactgatcagctggatataactctggagttcccgaaagaggagtgtgatgtcctatct
tcatttccatctgttataaatttatcgatacctggcactgaaccatcaccaactttaaat
aagcaaacaggagatggccttaaagttggtttttccattgctgagaaccgattcagggag
gcaacaagagtttgtgaagaagacagctctggatgggcttcatctgcattcccaaccaat
gatgctaggtctcgacctggatccaggatacaatcctctggaaagcaaaagtcttctgta
tctgactctgctaagccatctaggtcaaagtccaaaagagcttcaacagatcctagtgaa
atgcatcaccatcaggctgactcgatatcccagtcagtatcaccacttaaggatctgaga
ttcgatctcacttcatccactgccgatgaagttggaattgatggtatggatggcaatttg
ctctttcgcttgaatggggaaagttcagaggaaatgtgtagtgtggaaatgttcccacat
gattatgatgctggtttaatttcagaccttgatgattgtacagcattctctgaatttact
gacattagataa
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integrated database retrieval system
