Cajanus cajan (pigeon pea): 109808141
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Entry
109808141 CDS
T04868
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109808141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109808141
03009 Ribosome biogenesis [BR:
ccaj03009
]
109808141
04131 Membrane trafficking [BR:
ccaj04131
]
109808141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109808141
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109808141
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109808141
Membrane trafficking [BR:
ccaj04131
]
SNARE
SNARE associated proteins
Others
109808141
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109808141
Exosome [BR:
ccaj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109808141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
ATPase_2
AAA_28
Parvo_NS1
AAA_18
IstB_IS21
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
DUF815
NB-ARC
TsaE
AAA_24
ResIII
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
109808141
NCBI-ProteinID:
XP_020226595
LinkDB
All DBs
Position
11:complement(796937..802076)
Genome browser
AA seq
814 aa
AA seq
DB search
MADPTSSNPHKGQSSPDPKGNKKDYSTAILERKKSPNRLVVDEAVNDDNSVVTLHPDTME
KLQFFRGDTVLIKGKKRRDTICIVLADDQCDEPKIRMNKVVRANLRVRLGDVVSVHQCPD
VKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIE
TDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRSHVIVIGATN
RPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSDNVDLEKVARDTHGYVG
ADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALSSSNPSALRETV
VEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGS
SVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP
DESSRLQIFKACLRKSPISKDVDLAALARYTHGFSGADITEICQRACKYAIREDIEKGIE
KERRRRENPEAMEEDDNDEVPEIKPAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGF
GSEFRFPERNESTATGTSDPFSSATAEGDDDLYS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaacctcatctaatcctcataagggtcaatcctctccggacccgaaaggt
aataagaaggattattccacagcaatattagaacggaagaagtctcctaaccgacttgtt
gttgacgaagcagttaatgatgataattctgtggttactttacaccctgatacaatggag
aagcttcagtttttccggggtgacactgttctgataaagggaaagaaacgaagggacaca
atttgcattgttcttgctgatgaccagtgtgatgagccaaaaataaggatgaacaaggtt
gttcgggctaatcttagagtacggcttggagatgttgtctctgttcatcaatgtcctgat
gtgaagtatgggaaacgagttcacatccttccaattgatgacaccattgagggtgtaact
ggcaacttgtttgatgcatatctgaagccatactttctggagtcgtatcgtcctgtgagg
aaaggggacttgttccttgttaggggtggaatgcgcagtgttgaattcaaggtaatagag
accgatcctggtgaatactgcgttgtggcacctgatactgagatcttctgtgagggagaa
ccaatcaaacgggaagatgaagagagactaaatgaagttggctatgatgatgttggtggt
gttaggaaacaaatggctcaaattcgtgagctggtagaacttccactcagacatcctcag
cttttcaaatcaattggtgttaagcctccaaaaggaatcttgctttatggaccaccgggt
tctggaaagactctgattgcaagagcagttgctaatgagactggtgcattcttctttttg
attaatggaccagaaatcatgtcaaagctggccggtgagagtgaaagcaatctgaggaag
gcatttgaagaagctgaaaagaattccccttctatcatttttattgatgaattagactcg
attgctccaaagagggaaaagacacatggtgaagtggagaggcgaattgtttcacaactt
ttgactcttatggatggcctcaagacccgatcacatgttatcgttattggagccacaaat
aggcctaatagtattgaccctgctctgagaaggtttggaaggtttgatagggagattgac
attggtgtaccggatgaaattggaaggttggaggttcttagaattcatacaaagaacatg
aaactttcagacaatgttgatcttgaaaaagttgccagagatacccatggttatgttgga
gcagatcttgctgctctttgcacagaggctgcactacagtgtatcagggagaaaatggat
gtgatcgacttagaggatgaaacaattgatgctgaggtgttgaattccatggctgtgact
aatgaacactttcaaactgctttaagttcttcaaacccatctgccctgcgtgaaacagtt
gtggaggttccaaatgtttcctgggatgatattggaggcttagagaatgtcaaaagggag
cttcaggagactgttcaatacccagtggaacatcctgagaagtttgagaaatttggcatg
tcaccttccaaaggtgttctcttttatggacctcctggctgtggtaaaaccctgctagct
aaagcaattgctaatgaatgtcaagccaactttataagtgttaagggacctgagttgctg
acaatgtggtttggtgaaagtgaggcaaacgttcgcgagatatttgacaaggcacggcag
tcagctccttgtgtgcttttctttgacgaacttgactctattgcaacccagagaggcagt
tctgtaggggatgcaggtggtgctgcagatagggtgttgaaccaactgttaacagaaatg
gatggtatgacagctaagaaaacagtttttataattggggcaacaaacagaccagacatt
atagaccctgcattgctcaggcctggacgtctggatcaattgatttatatccctttgccg
gatgaaagttcacgtcttcagatcttcaaagcatgcttgaggaagtcaccaatctcaaag
gatgttgatctagcagctcttgctcgttatactcatggattcagtggtgcagatattaca
gaaatttgtcaacgagcgtgcaaatatgccattagggaagatattgaaaagggtattgag
aaggagagaagaagaagagaaaatcctgaagccatggaagaagatgacaatgatgaggtc
ccggagataaagcctgcccactttgaggagtctatgaagtttgctcgccggagtgtcagt
gatgctgacatcaggaaataccaactctttgctcagaccttgcaacagtctcggggattt
ggatctgagtttcggtttccagagcgaaatgagagcactgcaacaggtacctcagaccct
ttctcatctgctacagccgagggagatgatgatttatacagttag
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