Cajanus cajan (pigeon pea): 109808226
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Entry
109808226 CDS
T04868
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109808226
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109808226
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GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
KH_KhpA-B
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
109808226
NCBI-ProteinID:
XP_020226714
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All DBs
Position
11:40882427..40887176
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AA seq
437 aa
AA seq
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MATLDPIQNGTANPLSSDNPAADPPSTTADDPAPEAAEKRWPGWPGHCVFRLIVPVLKVG
SIIGRKGELIKKTCEETRARIRVLDGAVGTTDRIVLISGKEEPEAPLSPAMDAVIRVFKR
VSGLSEIDGDNKASGVAFCSIRLLVASTQAINLIGKQGSLIKSIQENTGSSVRVLSGDEV
PFYAAADERIVELQGEALKVLRALEAVVGHLRKFLVDHSVLPLFEKTYNATISQERQADT
WVDKQSLHSASQPSIVTDMSLSTKRDSLFADRESQLDSFLPPSTMSIYGQDTSLSGLRSS
TLSRPNVPPIVTTVIQTMQIPLSYAEDIIGIQGANIDYIRRTSGAILTVQESRVPDEIIV
EIKGTSSQVQMAQQLIQEVVSNHKEPVASNYSSRLDTGLRSSYTQLGSSSYSSSSLPSQP
YSGYGSSGLGGYSTFRL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctcgacccaatccaaaacggcaccgccaaccccctctcatccgacaatccc
gccgcagaccctccctccaccaccgccgacgaccccgctcccgaggccgccgagaagcgg
tggccgggatggcccggtcactgcgtgttccgcctcatcgtgcccgtgctcaaagtcggc
agcatcatcggccgcaagggggagctcatcaagaagacctgcgaggaaaccagagctcgc
attcgcgttctcgacggcgccgtcggcaccaccgatcgaatcgtactcatatcagggaag
gaagagccagaggcacctctttctccagcaatggatgctgtaataagggtttttaaacgt
gtctcagggttatctgaaattgatggtgacaataaagcatcaggggttgcattttgttcc
atccgtttattggtggcctcaactcaggccatcaatttgattggaaagcagggctcatta
attaaatctatacaggaaaataccggatcttctgttagagtactgtctggagatgaggtt
cccttttatgctgctgctgacgagaggattgtggaactgcagggagaagccttgaaggtc
cttagggccctggaagcagtagttgggcacctgaggaagtttttggttgatcatagtgtt
cttcctttgtttgagaaaacttacaatgcaacaatctcccaagagcgccaggcagatacc
tgggttgacaaacagtcgctgcatagtgcttcacaacctagcattgtaactgatatgtca
ctttcaacaaaaagggattctctctttgctgaccgtgaaagtcaattggattcattcctc
cctccctccacaatgtcaatatatgggcaagatacttcactttctggtcttcgttcttcg
acactaagtcgacccaatgttcctcctattgttaccacggtaatacaaacaatgcaaata
ccactgtcctatgcagaggacatcattggtatacaaggggctaatattgattacattcgc
cgaactagtggggccatattgactgtgcaggagagccgtgtgccagatgaaatcattgtg
gaaattaaaggaacctcatctcaggttcaaatggcacaacagttgattcaggaagttgta
agcaatcacaaggaacctgtcgctagtaattacagcagcaggttagatacaggattgaga
tcttcttacactcaattgggaagttcatcgtattcctcatcttccctgccttcgcaacct
tacagcgggtatggatcttctggtctgggaggctatagtactttcagactttga
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