Cajanus cajan (pigeon pea): 109808238
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Entry
109808238 CDS
T04868
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109808238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109808238
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109808238
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109808238
NCBI-ProteinID:
XP_020226732
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All DBs
Position
2:24732126..24738429
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AA seq
320 aa
AA seq
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MVVSGGARVTTRPTKLECSYFLPTEESNPIFPFATSHLILRTKMSGRSSRTIYVGNLPGD
IRLREVEDLFYKYGPIVDIDLKVPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRV
ELAHGGRGHSSSVDRYSSYSGSSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGDV
CFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYIRVREYDRGYSRSPSH
DSRRSYSRSLSRSPYISRSRSRSRSQSHSYSDRSRSFSPKAKHSRRSISLSRSQSRSRSP
NSSSQPGQSRSPSQSPRSPS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtagtttctggtggtgcacgtgtcaccacaagacccacaaagttggagtgttcatat
tttctaccaactgaagaatccaatcccatcttcccattcgctacttctcatctaattcta
aggacaaaaatgagtggtcgatcaagtcgcacaatttatgttggcaaccttcctggtgat
attcgcttgagagaagtagaggatctgttctacaagtatggtcctattgttgacattgat
ttgaaggtccctccaagaccaccaggctatgcttttgtagagtttgaggatgctcgtgat
gctgaagatgcaattcaatatcgagatggttacaattttgatggttttcgattacgtgtt
gaacttgcacatggtggacggggacattcatcatctgtagaccgttacagtagctatagt
ggtagcagtggtagccgtggagtttccaggcgttctgactaccgtgttctggtcactgga
ttacctccatctgcttcatggcaagacctgaaagatcacatgcgcaaagctggtgatgtg
tgtttttcacaagtcttccgtgagcgtggtggcatgactgggatagttgattataccaat
tatgatgatatgaaatatgctatcaggaaacttgatgactcagaattccgcaatgccttt
tctcgggcgtacatacgagtgagggaatatgatcgaggttattctagaagtcccagtcat
gattcaaggaggagctattctagaagcctcagccgcagtccatatatctcacgtagccgc
agccgcagccgcagccaaagtcatagctatagcgataggagcagaagtttctctccaaaa
gcaaaacactctcggcgctcaatatctctttcaagatctcagtcaagatccagatctcca
aattcatcgtctcaacctggccagagtcgcagtcctagccaaagtcctaggagcccatca
tga
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