KEGG   Cajanus cajan (pigeon pea): 109808383
Entry
109808383         CDS       T04868                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109808383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109808383
   03041 Spliceosome [BR:ccaj03041]
    109808383
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109808383
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109808383
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109808383
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2 Cut8
Other DBs
NCBI-GeneID: 109808383
NCBI-ProteinID: XP_020226964
LinkDB
Position
2:12719280..12723744
AA seq 488 aa
MAKKRKVRSSDPEPTKPVEPAQQDQDPVELQQQQQQEPQPEPTLQDPNAMSLDEPAHEEQ
HLQEQNPEEEEEDEEEDQQKPETLEEDQPETLEEANHAAEANGAEEEEENEDLTLEEEPV
EKLLEPFTKEQLHSLVKQAVEKFPEFVDSVRQLADVDPAHRKIFVHGLGWDATAETLTSV
FGKYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKNPQKKIGNRTTSCQLASAGP
VPAPPPNANPVSEYTQRKIFVSNVSAEIEPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGF
ALFVYKSVESAKKALEEPHKNFEGHTLYCQKAVDGPKGNKGYHQYHHQQHSHHHHHHQPH
YSRKDKNKYSSGGGGPSHGSGHLMAPSGSAVGGFNPGVPAQGLNPALGQALTALLTNQGA
GLGGLGNLLGGLGGAPVNQAGPPASYGNQPAMGYGNQPAMQPGYQNPQMGQNSGVRPHPG
AGAPYMGH
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggccaagaaacgaaaggtccgatcctccgaccccgagcccactaaacccgtcgagcca
gcccagcaagatcaagacccagtcgaactccaacaacaacaacaacaagaaccacaaccc
gagccaaccctccaagaccccaacgccatgtccctcgacgaacccgcacacgaagagcaa
caccttcaagagcaaaaccccgaggaagaggaggaggacgaggaggaagatcagcagaaa
cccgaaaccctagaggaggaccaacccgaaaccctagaagaggcgaaccacgccgccgag
gcgaacggcgccgaggaagaagaggagaacgaggacctcactctggaagaagagcccgtg
gagaagcttctcgaacccttcacgaaggagcagcttcactcgctcgtgaaacaggccgtt
gagaagttccctgaattcgtcgacagcgttcgccagctcgccgatgtggaccccgcccac
cggaaaatcttcgtccacggcctaggctgggacgccaccgccgaaaccctaacctcggtt
ttcggaaagtacggcgagatcgaagactgcaaggccgtcaccgacaaggtttccggcaaa
tcgaagggttacgcctttatcttgttcaagcacagggacgatgctcgcaaggcgctgaag
aatccccagaagaagatcgggaaccgcaccacatcatgccagctggcctccgccggcccg
gtgccggctccgccgccgaatgcaaatccggtgtcggagtacacccagaggaagatcttt
gtgagcaatgtcagtgctgagattgagccccagaagctgcttgaattcttcaagcagttt
ggggaggttgaggatggacctcttggtcttgacaagaacactgggaaacccaagggtttt
gctctgtttgtttacaagtctgtggagagtgccaagaaggctttggaagagcctcataag
aactttgaggggcatactttgtattgccagaaggctgttgatggtcctaaggggaacaag
gggtatcatcagtatcaccaccagcagcattctcatcaccaccatcaccatcagcctcac
tattccaggaaggataagaacaagtattcatctggtggcggtggaccctcgcatggtagt
ggtcatttgatggccccttcggggtctgctgtcgggggtttcaaccctggcgtgcccgcg
cagggtttgaatccggcgcttggacaggctttgactgcgttgcttacaaatcagggagct
ggacttggggggcttggaaatctgcttggagggcttggtggtgcgccggttaaccaggca
gggcctcctgcttcgtatgggaatcagcctgctatgggctatgggaaccaacctgcaatg
caaccaggttatcagaatcctcaaatggggcagaacagtggtgtgagacctcaccctggt
gctggtgctccttacatgggccattag

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