Cajanus cajan (pigeon pea): 109808549
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Entry
109808549 CDS
T04868
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109808549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccaj04040
]
109808549
Ion channels [BR:
ccaj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109808549
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
109808549
NCBI-ProteinID:
XP_020227176
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Position
11:16051250..16062113
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AA seq
684 aa
AA seq
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MATTITEEDFSSSRASHVLDSTSDEEEEEEDGEEEEENENGSGGGGWLMGAACGGGGGGR
RREGGLLGRVVDPRSKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCLFVDGWLAV
TVTALRCMTDALHLWNMLLRIKMAKRTFGLGAAGASSAGLRDTRPRSVALGYLKSRTGFF
FDLFVILPLPQIVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLS
GYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAGQCLKEECGKTSGCGMKILSCQT
PIYYGSNSLLVRDKARLAWAENRNVRLTCLNGPDNYNYGAYKWTVQLVTNDNRLEKILFP
IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQL
KMRNIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMTRNLPEGLRRDIKYHLCLD
LVRQVPLFQHMDELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRD
GVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQH
FRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSL
GEDRLRLYTALLTSPKPNQDDFDF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctactaccataacagaggaagacttctcctcatcacgtgcctcccacgtgcttgat
tccacctcggatgaggaggaggaggaggaggatggagaggaagaggaggagaacgagaac
ggctccggcggcggggggtggttgatgggggcggcgtgcggtggcggaggaggggggcgg
aggagggagggagggttgctggggagggtggtggaccctcggtcgaagtgggtccaggaa
tggaacagggtgttcctgctagtgtgcgccgcggggctgttcgtggaccctctgttcttc
tacgcgctctccgttagcgactcctgcatgtgcctcttcgtcgacggctggctcgccgtt
accgtcacggcgctcaggtgcatgacggacgcgctgcacctctggaatatgctcctccga
atcaagatggccaagcgcaccttcggcctcggcgccgccggtgcctcctccgccggcctc
cgagacaccaggccgcgctccgtcgcgcttggctatcttaagtcgcggaccggattcttc
tttgacttgttcgttattctccctcttccacagattgtgctttgggtggcaatcccctcc
ttgttggagaaaggttcagttatgttggtgatgacagtgttcttaattatatttctcttc
caataccttcccaaaatttttcattctgtgtgccatcttcgacggacgcaaaacctctct
ggctacatttttggaacagtatggtggggaatcgcccttaacatgatcgcatattttgtt
gcttcccatgcagcaggtgcatgttggtacttgctggggatccaaagggcagggcagtgt
ctgaaagaagagtgtgggaaaacaagtggttgtggcatgaagattctgtcttgtcaaaca
cctatatactatggaagcaatagtttgttagttagggataaagcaagattggcttgggca
gagaacaggaacgtgaggctcacgtgcttaaatggtcctgacaactacaactatggagct
tataaatggacggttcagcttgtcactaatgataatcgattggagaagatacttttccct
atcttctggggcctaatgactcttagcactttcgggaacctagagagtacaactgaatgg
ctagaagtagttttcaacatcattgtgctgaccagtggccttcttctcgtcactatgttg
attggaaacatcaaggtatttttgcatgcaacgacctcaaagaagcaagcaatgcaattg
aagatgaggaacattgaatggtggatgaggaaacggcgtttgccgcaagggtttcggcag
cgagtgcgtaactatgagaggcagcgttgggctgcaatgcgtggagttgatgaatgcgag
atgaccagaaatctccctgaaggattgagaagagacattaagtaccatctttgtttagac
ttggtgagacaggtgccactattccaacacatggatgaactggttctagagaacatatgt
gatcgtgtgaagtctctgatattcacaaagggagaaacgatagcaagagaaggagaccca
gttcagagaatgctgtttgtagtaaggggtcaccttcaaagcagtcaagtcctaagggac
ggtgtgaagagttgctgcatgttaggtccaggaaacttcagtggggacgaactcctctca
tggtgtctaagaagaccattcatagagcgtcttccaccgtcttcatccacactcatcacg
ttggaaaccacagaggcatttggccttgaagccgaggacgtgaaatatgtgacacaacat
ttcaggtacacgttcgtgaaggaaaaggtcaagagaagtgcaaggtattattctccgggg
tggagaacttgggctgctgtggccattcaattggcatggaggaggtacaagcacaggttg
actttgacttccttgtccttcataaggcctaggaggcccttgtcgcggtcctcttccttg
ggagaggataggttaagactctacacagcgttgttgacctcaccaaagcctaatcaagat
gattttgacttttga
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