Cajanus cajan (pigeon pea): 109808583
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Entry
109808583 CDS
T04868
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109808583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109808583
03032 DNA replication proteins [BR:
ccaj03032
]
109808583
Spliceosome [BR:
ccaj03041
]
Complex A
U1 snRNP components
Sm proteins
109808583
U2 snRNP components
109808583
Complex B
U1 snRNP components
109808583
U4/U6.U5 tri-snRNP components
109808583
Complex C
U2 snRNP components
109808583
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109808583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Motif
Other DBs
NCBI-GeneID:
109808583
NCBI-ProteinID:
XP_020227223
LinkDB
All DBs
Position
11:complement(19038410..19041242)
Genome browser
AA seq
116 aa
AA seq
DB search
MKLVRFLMKLTNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGSNIRYYILPDSLNLETLLVEETPRIKPKKPTAGKPMGRGRGRGRGRGRGRGREH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttaggtttttgatgaagttgaccaacgaaactgtgtcaatcgagctcaag
aatggtaccattgttcatggcactattacaggtgttgatatcagtatgaatacacatttg
aaaacagttaaattgactctgaaagggaaaaacccagtgactctggatcatcttagtgtg
agaggcagcaacattcgatattatattcttcctgacagcttgaatcttgagactttgctg
gttgaagagactcctaggatcaagcctaagaaaccaactgctggaaaacctatgggaaga
gggcgtggtcgaggacgtggacgtggtcgggggcgtggtcgtgaacattaa
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