Cajanus cajan (pigeon pea): 109808737
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Entry
109808737 CDS
T04868
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03030
DNA replication
ccaj03410
Base excision repair
ccaj03420
Nucleotide excision repair
ccaj03430
Mismatch repair
ccaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109808737
03410 Base excision repair
109808737
03420 Nucleotide excision repair
109808737
03430 Mismatch repair
109808737
03440 Homologous recombination
109808737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaj03032
]
109808737
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109808737
Enzymes [BR:
ccaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109808737
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109808737
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109808737
MMR (mismatch excision repair)
DNA polymerase delta complex
109808737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
109808737
NCBI-ProteinID:
XP_020227443
LinkDB
All DBs
Position
11:44958437..44972665
Genome browser
AA seq
1085 aa
AA seq
DB search
MKKNGSRKRAPPPSQPPPAKHPSMTQEEEFMDEDVFLDETLLSADEESLILRDIEQRQAL
ATRLSKWTRPPLDADYVVQSRSVVFQQLEIDYVIGESHKELLPNSSGPAAVIRIFGVTKE
GHSVCCNVHGFEPYFYVCCPPGMGPDDISRFHQTLEGRMREANRNSNVGKFVRRIEMVQR
RSIMYYQQSNSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRFM
IDCNIVGGNWIEVPAGKYNKTARSLSYCQLEFDCLYSELISHPPEGEYSKMAPFRILSFD
IECAGRKGHFPEPTHDPVIQIANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFDTERE
VLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAANLKIAEFPILGRIRNSRVRVKDTTF
SSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISD
LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVL
SQLLRKARQKNLVLPNVKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAY
NLCYCTLVTPEDARKLNIPPESVNRTPSGETFVKSNLQKGILPEILEELLTARKRAKADL
KEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKL
VEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEYISGTFTKPIKLEF
EKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDR
DIPGAVQYVKTAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA
PNVGDRVPYVIVKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPILRIFEPILK
NASKELLHGSHTRSISISTPSNSGILKFAKKQLTCIGCKALLSNGHHTLCSHCKGREAEL
YCKTVAQVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARSQL
DRWNF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacggctcccggaagcgcgcgccgccgccgtcgcaacccccgccggcgaag
catccctcgatgactcaggaagaagagttcatggacgaagacgtgttcctggacgaaacc
ctcctttccgccgacgaagagtccctcattctccgcgacatcgagcagcgccaggccctc
gccacgcgcctctccaagtggacgcgtcctcctctcgacgccgactacgtcgtccaatct
cgcagcgtcgttttccagcagctggagattgattacgtgatcggagagagtcacaaggag
ttgctgccgaactcgtctggacctgctgccgttatcagaatatttggagttactaaggaa
ggacacagtgtttgctgcaatgttcatgggtttgagccatatttctatgtctgttgccca
cctggaatgggtccagatgatatctcccgttttcatcaaactcttgagggaaggatgaga
gaagccaatagaaacagtaatgtgggaaaatttgttcgccgcattgaaatggtgcagaga
aggagtattatgtactatcaacaatccaattcccaaccctttctcaaaattgtagttgca
cttccaacaatggttgccagctgtcgtggcatacttgacaggggtattcagcttgatggt
ctgggaatgaagagcttcttgacttatgaaagcaatgtactttttgcccttcgcttcatg
attgattgtaacatagttggtggaaattggattgaagttccagctggaaaatataataag
acagcaagaagcttgtcttactgccagttagagtttgattgcttgtattccgaattgatt
agtcatcctccagaaggggaatattcaaagatggctccattccgcatattgagttttgac
attgagtgtgctggtcgtaaaggtcattttcctgagcctactcacgatcctgttatccag
attgctaatttggttactttacaaggagaggaccagccattaattcgtaatgtgatgacc
cttaaatcatgttctcctatcgttggtgttgatgtgatgtcatttgatacagaaagagaa
gtcctgctagcttggagggattttattcgtgaagtggatccagatattattattggatat
aacatctgcaaatttgacttaccatatcttattgagagagctgcgaatctgaagatagca
gaatttccaattctgggccgtatcaggaacagtagagttcgagtaaaggatacaactttc
tcgtcaaggcagtatgggaccagggaaagtaaagaagttactgtagaagggagagttcag
tttgatttactccaggttatgcaaagagactacaaattaagttcttattcattgaattct
gtgtcagcccacttcctttctgagcagaaagaggacgttcatcattcaattatatctgat
cttcagaatggaaatgcagaaactcggaggcgccttgctgtgtattgtttgaaggatgca
tatctccctcagcggcttttggataaattgatgttcatttacaattatgtggagatggct
cgagtaacaggtgtcccaatttcttttctactttccaggggccaaagcattaaggttctt
tctcaacttcttaggaaggcaagacagaagaatcttgtccttcctaatgtcaaacaggct
gggtctgaacaaggaacatttgaaggtgccactgtattggaggcaagggcgggattttat
gaaaaacctattgctactttagattttgcatccttgtatccatctattatgatggcctat
aatttatgttattgcactctggtgactccagaagatgctcgcaagcttaacatccctcca
gagtctgtgaacagaactccatctggggaaacatttgttaaatcaaatttgcagaaggga
atacttcctgaaattcttgaagagctattaacagcccggaaaagggcaaaagcagacttg
aaggaggcaaaagatccccttgagaaggcagtgctagatggtagacagctggccctgaaa
attagtgcaaattccgtgtatgggtttacaggggctaccattggtcagttaccatgtcta
gagatatcatcaagtgtaacaagctatggtcgacaaatgattgagcacacaaaaaaactc
gtggaagataaatttacaacacttaatggctatgaacacaacgctgaggtaatatatgga
gacacagattcagtcatggtacaatttggtgtgtctgccgtagaagaggcaatgaacttg
gggagagaagctgctgaatatattagtggaactttcacaaaacccatcaaactagaattt
gagaaggtttactatccatatctcttgatcagcaagaagagatatgctggtttgttttgg
acaaaaccagacaactttgacaaaatggacactaaaggtattgaaacagttcgaagagac
aattgtttattggtcaaaaacctggtgaacgattgccttcacaaaatactgatcgacaga
gacattcctggggcagttcagtatgtcaagactgcaatttcagatcttctcatgaatcgc
atggatttatcacttctggtcattacaaagggtttaacgaagacaggagatgattatgaa
gtaaaggcagctcatgttgaacttgctgaaaggatgcgcaagcgagatgctgccactgct
ccaaatgttggagatagagtaccttatgttattgttaaagctgcaaaaggtgcaaaggca
tatgagagatcagaggatcctatctatgtgctagagaacaacataccaatagatccccaa
tactatcttgagaatcaaattagcaagccaattctgagaatttttgagccaattctgaag
aatgctagcaaggaacttctccatggaagccatacaagatctatttctatttctaccccg
tcaaacagtggcatattgaaatttgctaagaaacagcttacgtgcattggttgtaaagct
ttacttagcaatggtcatcacactctctgttcacattgcaaaggaagggaagctgagctg
tactgtaaaacagtagctcaagtgtctgatctggagatgctttttgggaggttgtggaca
cagtgtcaggagtgccaaggttcacttcatcaggatgttctctgcacaagtcgggattgt
ccaattttctaccgacggaaaaaggcacagaaagatatggccgaagcaaggtcgcaattg
gaccgatggaacttctaa
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integrated database retrieval system
