Cajanus cajan (pigeon pea): 109808872
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Entry
109808872 CDS
T04868
Name
(RefSeq) LOW QUALITY PROTEIN: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
ccaj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109808872
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109808872
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109808872
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109808872
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109808872
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109808872
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109808872
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109808872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_13
SPARC_Ca_bdg
PCDH15_12th
IGFBP
Motif
Other DBs
NCBI-GeneID:
109808872
NCBI-ProteinID:
XP_020227627
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All DBs
Position
11:complement(46433547..46439574)
Genome browser
AA seq
473 aa
AA seq
DB search
MYSGSSDGEAHDAPQRKIPPASSMLWVRNLRRFIGSGAGLGSEALMELETKRILLDIFKE
KQKKSAEGGTIPSFYKKKPEDGSISHRVQRLAKYRFLRKQSDLLLNADDLDAMWVCLREN
CVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDEQGRIAILPFYLY
VMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPAAFVQMYCRIAA
HKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSLTSAQRICD
MFLALDKDTNGTLSKQELREYADGTLTDIFIERVYDEHXKSGGGNAREMDFESFLDFVLA
LENKDTPEGLTYLFRCLDLQGRGYLTTADIHSLFRDVHHKWIEGGNYELCIEDVRDEIWD
MVKPADPLKITLADLLSCKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcggctccagcgacggcgaagcccatgacgcccctcagaggaaaattcccccg
gcctcctccatgctctgggtccgcaatcttcgccgtttcatcggatccggcgccggtctc
ggatccgaagccttgatggagcttgagacgaaaagaattttgctcgacatttttaaagaa
aagcagaagaaaagcgccgaaggtggtacaattccgagtttctacaaaaagaaacctgaa
gatggatcaatcagtcatagagtccagagattggcgaagtatcgcttcctaaggaaacaa
tcagatcttttgctgaatgctgatgatttggatgcaatgtgggtgtgcttaagggagaac
tgcgtgattgatgatgctactggtgcagaaaagatgaattatgaagacttttgccacatt
gcctctgtatgtacagaacaaataggtcctaaatgccggcggttttttagtccttcaaac
tttatgaagtttgagaaagatgagcagggaagaattgccattctacccttttacctttat
gtgatgcgaacggtatcacttacacaggcaagaattgatatgagtgagcttgatgaggat
tctgatggtttccttcagccacatgaaatggaggcctatatacgaggtcttatacccaac
ttggcacagttacgtgatatgcccgcagcctttgttcaaatgtattgtcgaattgctgca
cacaaattcttcttcttttgtgatcctcatagaagaggaaaagcttgcatcaagaaagtg
ctgcttagtaattgtctccaggaactcatggagcttcaccaggaaagtgaagaagaagtc
acagacacagagcaagccgaaaattggttctctttgacttctgctcaacgtatatgtgac
atgtttcttgcccttgataaagatacaaatgggacattaagcaagcaggagctgcgagaa
tatgcagatgggactctgactgatatttttattgagagagtatatgatgaacacnnaaag
agtggtggtgggaatgcccgggagatggatttcgagagtttcttggactttgttctggct
ttagaaaataaagacaccccagaaggattgacatacttatttcggtgccttgatcttcaa
gggaggggttacctcactacagctgatattcattcccttttcagagatgtacaccataaa
tggatagagggtggcaactatgaactttgtattgaagatgtaagagatgaaatctgggat
atggttaagccagcagatccactcaagataacattggcagacctactgtcctgcaaacag
ggtggaactgtagccagcatgctcatagatgtgcgtggtttctgggctcatgacaacaga
gaaaatcttctccaggaggaagaagagccagaggaagaatga
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