KEGG   Cajanus cajan (pigeon pea): 109808930
Entry
109808930         CDS       T04868                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109808930
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109808930
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109808930
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109808930
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT HEAT_EF3_N TOR1L1_N UTP20_N HEAT_EZ
Other DBs
NCBI-GeneID: 109808930
NCBI-ProteinID: XP_020227718
LinkDB
Position
11:complement(4076878..4088936)
AA seq 1147 aa
MAEATQLTRHIESYVDSSSSLTHQAATLNAIAALVKTDALPLQALVRELDMYLTTTDNVI
RARGILLLAEVITRIESKPLDSAIIHSLVGFFKDRLADWRAVRGALVGCLALIRRKSVVG
MVTGSDATAIAQSFLQYMQVQSLGQYDRKLCFELLDCLLERYSDVVTTLGEDLIYGICEA
IDAEKDPECLMLAFHIVESLAQLYPDSSGLLASFAKDVFDILEPYFPIHFTHPSSGDTPV
QRDDLSKSLMSAFSSTPLFEPFVIPLLLEKLSSSLHSAKIDSLKYLRVCSSKYGAEKIAK
YARAIWSSVKDTLSTYLGEPKFSFTIAPVDGIGFPENEIGIEALSLLQQLIVQNSSLLVS
LIIDDEDVNEIFKTIASYEIYDAIPVQEKKKLHAIGRILYITAKSTISSCNAVFENLFSR
MMDDLGFSVSNADSFSNGDIFTSQRVKFGFLYLCIELLAGCKELIVGSDKPALQYVFEHE
TCCIMLHRFSTQLLNAFGSVLAVSAERCPLDPDIYIGVKGLQILATFQSDVFPIQKSIFE
NILNKIMSIIMEDFEKTILWESALKALCHVGSFVQMFHESEKAMSYRSLVVEKIVELLSL
DDITLPFSLKVEALSNVGMTGRKNMLTILQGLGTAVLANLSKVYVHRNVRSSETAVQLLE
CYSCKLLPWIHENGGTEDFAVQFALDIWSQAGNCMDFSAPFVEKGLLDAIMKAMKLSVGS
CVVESQNLIIQNAYSILSSHTNFQLKEVETLPLTPGKYDISLRDEGIISLFASVVVAVHP
KTHIPDIRVLMHLFIITLLRGVVPVAQALGSILNKLVSTSNSAENSGDLTLEEALDVIFN
TKICFSSTDMLQRCNGTSNGNEMVLTDICLGIANDRLLQINAICGLSWIGKGLLLRGHEK
IKDITKIFMECLISGTKSALPLIKDSLENTEEQIQDPLVMKCAADAFHVLMSDSEVCLNR
KFHATIRPLYKQRFFSSVMPIILQLITKSYSSLSRSFLYRAFAHIMSDTSMVAILSEAKK
LIPVLLDCLSMLTEDIQDKDMLYGLLLVLSGMLTEKNGQEAVIENAHIIINCLIKLVDYP
HKMLVRETAIQCLVALSELPHARIYPMRTQVLRAISTCLDDTKRAVRYEAVKCRQTWASM
SSRSLHF
NT seq 3444 nt   +upstreamnt  +downstreamnt
atggcggaagccactcaattgactcgccacattgagtcctacgtcgattcttcttcttct
ctcacgcaccaggctgcaactttgaacgcaattgcagctctcgtcaaaactgatgcttta
cctctgcaagcactggttagagagttggacatgtatttgaccacaacagacaacgttatt
cgtgcaagaggaattcttcttctagcagaggtgataactcgtattgaatcaaaacctctt
gacagtgcaattatacatagcttggttggattcttcaaggacagactggcagattggaga
gcagtacgaggtgcacttgtgggttgcttggcattgataaggagaaaaagtgttgtgggt
atggtaactggtagtgatgccacagcaattgctcagtcttttttacaatacatgcaagtt
cagtctttaggacagtatgacaggaagctgtgctttgaactgcttgattgcttgcttgaa
cgctactctgatgttgttactacactgggggaggaccttatttatggaatttgtgaagcc
atagatgcagaaaaggatccagaatgtttaatgcttgcttttcatattgtcgagtctttg
gcacaattatatcctgattcatctggtctacttgcaagctttgctaaagacgtttttgat
attttagaaccttactttcccattcactttacacatccaagtagtggagatactcctgtg
caaagagatgacctgtcaaagtctctgatgtctgcattctcttctacacctctctttgag
ccatttgtcattcctctgcttcttgagaaactttcttcttctctgcattcagcaaagatt
gattccttaaaatatcttagagtttgctcttccaagtatggggctgagaaaattgcaaaa
tatgccagggctatttggtcttcagtaaaagacaccctatctacttatttgggggagcca
aaattttcctttaccatagcacctgtagatggtatcggcttcccagagaatgaaattggg
atagaagctctgtccctccttcaacagcttattgtgcaaaatagcagtttgttagttagc
ttgataattgatgacgaggatgtcaacgaaattttcaagaccattgcttcttacgagata
tatgatgctattcctgtgcaagaaaagaagaaactacatgctattggtcgtattctgtat
attacagccaagtctaccatttcttcttgtaatgccgtgtttgaaaatcttttctcccga
atgatggatgatttgggattttctgttagtaatgctgatagtttctcaaatggtgatatt
ttcacctctcagagagtcaagttcggattcctttatctctgcattgaactacttgcggga
tgcaaggagttaattgttggatctgacaaaccagcactgcagtatgtttttgaacatgag
acatgttgcattatgcttcataggttttcaactcaattattgaatgcatttggttcagtc
ttggcagtaagtgctgaaagatgcccccttgatccagatatatacattggagtgaagggt
ttgcagatacttgccacgtttcaatcagatgtttttccaatacaaaaatcaatatttgag
aatattttgaataaaatcatgtcaattatcatggaggactttgagaaaacaatactatgg
gaatcagcattgaaagcattatgtcatgtcggctcatttgttcaaatgtttcatgagtct
gaaaaagctatgagttacaggagtttagtcgtagaaaaaattgtggaacttctctctctt
gacgatattactctgcccttctcactcaaagtagaagcattatctaatgtaggcatgact
ggaaggaaaaatatgctaacaattcttcaagggttggggacagctgtgttagcaaatcta
tctaaggtttatgttcatagaaatgtaaggtcttctgaaactgctgttcagcttttggag
tgctattcttgcaagttgctcccatggatccatgaaaatggaggtacagaggactttgca
gtgcaatttgctctggacatttggagtcaagcaggaaattgcatggatttcagtgcccca
ttcgtagaaaagggtcttcttgatgcaataatgaaagcaatgaaactttctgttgggagt
tgtgttgtggagagccaaaatcttataattcaaaatgcttacagtatactatcatcacac
acaaacttccagcttaaagaagtggaaacattaccactaactcctggaaaatatgacatt
tcccttagagatgaagggataatttcattatttgcatcagtagttgttgcagttcaccca
aaaacacacattccagatataagagtacttatgcatctatttataataaccctcctcagg
ggtgttgttccagttgcacaggccttgggttccatactaaacaaattagtttcaacatcc
aacagtgcagagaactctggtgatcttaccttggaagaagctctggatgttatatttaat
acaaaaatatgcttttctagtactgatatgttgcagagatgtaatggaacaagtaatggg
aatgaaatggttcttactgatatatgcctgggcattgcaaatgataggttgcttcaaatc
aatgccatttgtgggctctcctggataggaaaaggtttacttctacgtggtcatgaaaag
attaaagacatcactaagatttttatggagtgcttaatatcaggcacaaagagtgccttg
cctttgatcaaagattctcttgaaaatactgaagagcagattcaggatcctttagttatg
aaatgtgctgctgatgcttttcatgttcttatgagtgattctgaagtttgtttgaacaga
aaatttcatgccacaatacggcctctatataagcagcgattcttctcttctgtgatgcct
atcattctgcagttgattacaaaatcttactcctcattgtctagatcttttttgtatcga
gcttttgcacatatcatgtctgatacttcaatggttgctatactgagtgaagctaaaaag
cttataccagttctattggattgcttgtccatgttgacagaagatatccaagataaagat
atgttgtatggtctgttgctagtcttatctgggatgttgacggagaaaaatggacaagaa
gctgttattgagaatgcacacattatcatcaattgtctgattaagcttgtagactacccg
cataagatgcttgttcgagagacagctattcaatgtcttgttgccttgtctgagttgccc
catgcccgtatctatcctatgaggacacaggttctacgagcaatatcaacgtgtcttgat
gatacaaagagagctgttcgctacgaagctgtcaaatgtcggcaaacatgggcgtcaatg
tcatccagaagtcttcatttctga

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