Cajanus cajan (pigeon pea): 109809798
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Entry
109809798 CDS
T04868
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109809798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109809798
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109809798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
TPR_VPS8_2
WD40
WDR55
WD40_Gbeta
Beta-prop_THOC3
Beta-prop_EML
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_Aladin
zf-RING_Vps41
Beta-prop_HPS5
zf_RING_Vps8
zf-RING_2
MRF_C2
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
109809798
NCBI-ProteinID:
XP_020228787
LinkDB
All DBs
Position
11:22492302..22504447
Genome browser
AA seq
1915 aa
AA seq
DB search
MELDLRSFLPSSVSDDDADEAPHRTIDEILNDCDTSSSSSSPPSSPSHSLSSLTNPQNPT
LQQQKPLQPAPDSLSRPKPAQFPDRTRPFSSLLRGVRSNAKPGAALAAAAAASRSVPTPH
AAAIISRRKFAAANSAESSSIAATGDDCSDVSSKGESGEPGEKLDPVLRKVETQSSESAS
VAGERFESDAEIATDSKAGSADIQVHSDNDNDDDDKDNCNSNNNGDFIGNGNDSSVVSEE
KRDLDEVDRDHVKDMNSPPFDDDDVRDFGGNNGGDERITATGTAVGTEVVNNGSSSVDDV
KNEVSVVGGDDGSSSGDVAELVEERLEELESRRAAKRAEKKRESSMKPLELAEELEKKRA
STGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDADNVVTRAISSQTFRREQGSARALAVH
TNYIAVGMAKGLIVVFPSKYSIHHSDNSDGKMLMLAIQGDRSHAPVTSMSFNQQGDLLLA
GYADGHVTLWDVQKGVVAKVISGEHTAPVVHTFFLGQDPQNTRQFKAVTGDCKGLVLFHI
ISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPFSQGNTTTSASSISSMM
GGVVGGDSGWKLFNEAPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGIREGSMP
YTAWKYMTQTCSSTENMSAEAVERVSLLAIAWERKVIVAKLVKSELKVYGRWSLDGAAIG
LAWLDDQMLVVLTSSGQLYLFSKDGTVIHQTSFAVNGIGGDDLVSYHTQFNNIFGNPEKA
YHNSVAVRGASIYVLGPTHLLVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVV
DLPRTLDAVHEAIMPFLVELLTSYVDEVFSYISVAFCSQVGKLDQSNDSNSRSNSVHSEI
KEQYARVGGVAVEFCCHIKRTDILFDEIFSKFVDVQQRETFLELLEPYILKDMLGSLPPE
IMQELVEYYSTKGWLQRIEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFR
APLEELYAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGTIPPTRLPSLRRELVEF
LLKDSCTPKSQTVSHFVSRRPHLNLYLLLKLDTEATLDVLRCAFMEDEVSNACSSSPDSA
NKPEEEAKKENDNVTETQNALIQNTVDALIQIIDMNIVPTDTTSSSGDNGLIKEWPSKDI
GYLFEFIAYYVALQRAKVSKGVLCQILEYLTSDSHFSTNVSVHGSTPKNREKQVLALLEV
LPESDWDVSFVLGLCERAKYYQVCGLIHSVRHEYVAALDSYVKDVDEPVHAFSFINKAFS
QLTDNDHAALRSAVMLRIPELVELSREGAFHMVISHFSDESSRIITELHTRPKSLFLYLK
TLIELHLFGTLDLSNLRKDDTVNPLNGRKAKDHTQGVRDYIENISNFPKYMRENPMHVPD
DLIELYLELLCQYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDAAAFLLERVGDVGSAL
LLTLSDLNDKFVELDAAVEAVVLNHRRVGSLHMEVFNTVLRTKEVNDIHNLLRACIGLCQ
RNTPRLNPEESEAHWFKLLDSFCDPLIDSYVEERAHENKSYFGMLTGSADSQVDKDTYKS
SWKISKSQNGHILRKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILGM
LGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLLCCICNCLLTKNYDSSGI
RIFNCGHAVHLQCEVSESEASSKGSSSGCPVCMPNKKSQKSRNKSIVATNGLVNKFSSRR
QYPRGSTIHPHDSDLSENMYGQQQMSRFEILSSLQKNQRFMQIENLPPLKLAPPAVYHEK
VSRVTDFQAGESSNSSAVTEKRSKSKQNRELRVKGSSIRFPLKSSIFGKEKTNKR
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacctccgttcattcctcccctcctccgtttccgacgacgacgccgacgaa
gctcctcaccgcaccatcgacgaaatcctcaacgactgcgacacttcttcttcctcttcc
tcacctccctcctctccctctcactccctctcttcactcaccaatcctcaaaaccccact
ctccaacaacaaaaaccactgcaacccgcgcccgattcactctctcgtcccaaacccgca
caattccccgaccgcacacgccccttctcctctctgctgcgcggcgttaggtccaatgcc
aagcccggggcggcgctcgctgccgccgccgccgcctcgcgatccgtccccactccgcac
gccgcggcgatcatttccaggaggaaattcgcggccgcgaacagcgccgaatcgagttca
atcgctgccaccggcgacgactgttccgatgtttcttccaaaggcgaatcgggcgagcct
ggcgagaaactcgatccggtgctgcggaaggtcgagactcaatctagtgaaagtgcttcc
gttgccggcgaacgttttgagagtgatgcggaaatcgccactgattcgaaggctggcagt
gctgacattcaggtgcacagtgataatgataatgatgacgatgataaagataattgtaat
agtaataataatggtgattttattggtaatggtaatgattcttctgttgtgagtgaggag
aagagggatttggatgaggttgaccgtgatcatgtgaaggatatgaattctccaccgttt
gatgatgatgatgttcgtgattttggtggaaataatggtggtgatgagagaatcactgct
acgggtacagctgtgggaacagaagtggtgaataatggtagtagttctgtggatgatgtt
aagaatgaggtgagtgttgttggtggtgatgacggtagttcatcaggtgatgttgctgag
ctagtggaagagagacttgaggaattggaaagcagaagagctgctaagcgagcagagaag
aaacgagagtcttcgatgaagccgcttgaattggctgaagaactggagaagaagcgtgct
tccactggtttgcatttggaagagggtgctgctgcccagccaatgaggctcgagggggtt
cggagagggtccacgacgttgggatactttgatgttgatgctgataatgtggtcacaaga
gccatttcatcccaaacgttcaggcgggaacaaggatctgcccgagccttggcagttcat
actaattacattgcagtaggaatggcaaaagggctcattgttgtatttcccagtaaatat
tcgattcatcattctgacaactctgatggaaagatgttgatgcttgctattcaaggtgat
cggtcgcatgctccagtgacatccatgtctttcaatcaacaaggagaccttcttttagct
ggttatgctgatggtcatgttaccttgtgggatgtacagaaaggggtagtggcaaaagtt
attagtggtgagcatacagcaccggtggtacatacattttttttaggacaggatcctcag
aatactcgccaatttaaagcagttactggtgattgtaagggtctggttctcttccacatt
atctcagtggttcctttgtttagtagattctccatcaaaactcagtgtcttcttgatggg
caaagtacaggtttggtgctttcagcttcaccactcctttttgatgacttcagtggaagt
gcttcgcctttttctcagggaaacaccaccacctcagctagcagtataagcagcatgatg
ggaggtgttgttggtggagattcaggttggaaactcttcaatgaagccccttctttggtt
gaagaaggtgtggttgtatttgtcacccatcaaactgctttggtggtacggctgagccct
acattgcaagtctatgctcaactctctagaccagatggaattcgggagggttccatgcca
tatactgcatggaaatacatgacacaaacatgtagttctaccgaaaatatgtctgcagaa
gctgttgaaagagtttccttgcttgcaattgcttgggaacgaaaggttattgttgcaaag
ttagtcaaatcagaattgaaagtatatggaaggtggtctcttgatggtgcggctataggt
ctggcatggctggatgaccagatgctggtagttctcacttcaagtggacaactatattta
ttttccaaggatggaactgtgattcaccaaacaagttttgctgtaaatggtattggagga
gatgatctagtctcttatcatactcaatttaacaatatatttggaaatcctgagaaagct
tatcataattctgttgctgtaagaggagcttctatttatgtacttggtccaacacatctt
cttgtttctcgtcttctcccttggaaagagcgtattttggttttgcggaaagcaggtgac
tggatgggtgccttgaacatggcaatgactctttacgatggccatgctcatggggttgtg
gaccttcccagaaccttggatgctgtacatgaggccataatgcccttcttggtggagttg
cttacatcatatgttgatgaagtgttctcctatatttcggtggcattctgcagtcaagtt
ggaaaactggatcagtccaacgattcaaatagtagaagcaattcagtgcattctgagata
aaggagcaatatgcccgtgttggtggagttgctgttgaattttgttgtcatatcaaacgg
acagacattctttttgatgaaattttctccaagtttgtggatgttcaacaaagagaaaca
tttttggagcttctggagccatacattttgaaggacatgcttggatctctacctcctgag
attatgcaagaactggtagagtattatagcaccaaagggtggttacagcggattgagcaa
tgtgtacttcacatggatatatcatccttggattttaatcaggtcgtcagattatgccgg
gagcatgggctatatagtgccctggtgtatgtctttaataaaggattagatgattttagg
gcgcctctggaggagctgtatgctgtcttgcaaaatagccaaaaggaaagtgctactgca
cttgggtacagaatgctggtttatctcaagtattgctttacaggtcttccctttccacct
ggccgtggaactattcctcccacacgcttaccatctcttagaagagaacttgtagagttt
ttgttaaaggactcctgtactccgaaatcacagacagtttcacactttgtatccagacga
ccccacctgaatctttatcttctcttaaagttagacactgaagctacattggacgtcctc
agatgtgctttcatggaagatgaagtttcaaatgcatgctcatcttcaccagattcagcc
aataaacctgaagaggaagcaaaaaaagaaaatgataatgttactgaaactcaaaatgct
ttgattcagaacacagttgatgctctgattcaaataattgatatgaatattgttcccaca
gatacaacctctagtagtggtgataatgggttgataaaggaatggccttcgaaggacata
gggtatctgtttgagttcattgcatattatgttgctcttcaaagagctaaggtttcaaag
ggtgttctgtgtcaaatattggaatatttgacatcagatagtcacttttcaactaatgtt
tctgttcatggttcaactccaaaaaatagagagaagcaagtgcttgcacttttggaagta
cttcctgagtcagactgggatgtgtcatttgtgctaggcctttgtgagagagccaaatat
tatcaggtttgtggattgattcatagtgtcagacatgaatatgtggctgcattggatagt
tatgtgaaagatgtagatgagccggttcacgccttctcctttattaacaaagcattctca
cagttaactgacaatgaccatgcagctcttcgatcagcagtcatgttgcgaattcctgag
ttggttgaactaagcagggagggtgcattccacatggttatcagtcattttagtgatgaa
agttcccgtatcataactgaacttcacactcgtccaaaaagtcttttcctttatttaaag
actctcattgagcttcacttatttggcaccctagacttgtctaatttgagaaaggatgac
actgtgaatccccttaatggaaggaaggccaaggatcacacacaaggggtcagagattac
atagagaatatatctaatttccccaagtacatgcgtgaaaatcctatgcatgtgcctgat
gatcttattgagctttaccttgagttattatgccagtacgaaggtggttcagttctcaag
tttctggaaatgtttgatagctatcgagttgaacattgtttacgcctgtgtcaagaatat
ggcattatagatgcagctgcattcttattagaaagggttggtgatgttggtagtgccctt
ttacttaccctttcggatctaaatgataaatttgttgagcttgatgccgctgtggaagct
gtagttttaaaccatcgcagagttggttctttgcatatggaagtattcaacactgtttta
agaacaaaggaggtaaatgacatccacaatttattgcgtgcctgtattggtctgtgtcag
cggaacacccctcgcctaaatcctgaggagtcagaggcacattggtttaaattacttgac
tcgttttgtgacccattgatagattcatatgttgaagaaagagcgcatgaaaataagagt
tattttggaatgctaactggatcagcagattcacaagtggacaaagacacctataaaagc
agttggaaaatttcaaagtcccagaatggtcatatcctgagaaagttgctatcccagttc
attaaagagattgtcgagggaatgataggttttgttcaccttccaactatcatgtctaaa
ctgctgtctgataatggtagtcaagaatttggtgattttaaactcaccatattggggatg
ctgggaacatatggctttgaaagaagaattctggatgctgccaaatcgttaatagaagat
gattcgttttatactatgagtttactcaagaaaggggcctcccatggatatgctcccagg
agtcttttgtgctgtatttgtaattgtctcctaacgaagaactatgatagctctggaatt
cggattttcaactgtggccatgcagtgcacctgcaatgtgaagtttcggaaagtgaggcc
tcaagcaaaggatcttcatctggatgccctgtatgcatgcctaacaagaaatcccagaag
tctagaaacaaatcaatcgttgcaacgaatggcttggtcaataaattctcatcaaggcgc
caatacccccgtggaagtaccattcatcctcatgacagtgatttatcagagaatatgtac
ggacagcaacagatgtcacggtttgagatcttgagcagcttgcagaagaatcagagattt
atgcaaatagaaaacttgcctccgctgaagcttgccccacctgctgtgtaccatgaaaag
gtgagtagagtaacagactttcaggctggggaaagtagtaatagttctgctgttactgag
aaacgaagtaaaagcaagcaaaatcgggagctgagagttaagggttcatcaattcgattt
cctttaaaatcaagtatatttggcaaggagaagacaaataagcggtga
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