KEGG   Cajanus cajan (pigeon pea): 109809868
Entry
109809868         CDS       T04868                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03082  ATP-dependent chromatin remodeling
ccaj03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109809868
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109809868
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccaj01009]
    109809868
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109809868
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109809868
Protein phosphatases and associated proteins [BR:ccaj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109809868
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109809868
    SWI/SNF complex
     109809868
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109809868
   PBAF complex
    109809868
   SWI/SNF complex
    109809868
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 109809868
NCBI-ProteinID: XP_020228872
LinkDB
Position
11:complement(43376967..43380105)
AA seq 240 aa
MKTPISGLYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV
KDLKLPPAFVTQIAQSIQSQLAEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL
NNFESDPEEFARIFCKDMGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG
AEYTPVSKGGAVAVDLVKLFSPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaaaccccgatttcgggtttgtaccgaaaccccgtgaagttcagaatgccaactgcg
gagaacttggttcccattcgcttggatatcgaaatcgaggggcagagatacaaagacgca
ttcacttggaacccttctgatcccgattccgaggttgtcgtctttgcaaaaaggactgtt
aaagacttaaagctccctcccgcgtttgttacacagattgctcaatcaattcaatcacag
cttgccgagtttcgatcctatgaaggccaggatatgtatgctggggagaagattgttcca
atcaagcttgatcttcgtgttaatcacacgcttgtgaaggaccagtttctatgggacttg
aacaactttgagagtgatcctgaagagtttgccagaatcttctgcaaggacatgggcatt
gaagatcctgaggttggaccagctattgcctttgctatcagagagcaactttatgagatt
gcaattcaaagtgtggtttcagcgagagaaagcagaatgagcaagaagggtcgtcgaggg
gctgaatatactcctgtcagtaaaggaggcgctgtagcagtggacttggttaagttattt
agtccaaaatctagtgtggtccggaaaagaaaggagtgggacgtatatgaacctattgtg
gacctactatccaacgaggaagtggatgcccttgaagcaaaagaagagagaaatttcaga
tga

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