Cajanus cajan (pigeon pea): 109809968
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Entry
109809968 CDS
T04868
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04142
Lysosome
ccaj04144
Endocytosis
ccaj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109809968
04142 Lysosome
109809968
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109809968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109809968
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109809968
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109809968
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109809968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
109809968
NCBI-ProteinID:
XP_020228989
LinkDB
All DBs
Position
11:complement(29362186..29374600)
Genome browser
AA seq
1701 aa
AA seq
DB search
MAAANAPIAMREPLTLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKVPGNENPSTLISFATKTLNAGQIIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEMAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDGNVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLSEI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADIVLELAWMHNMIDFAFPYLLQFIREY
TGKVDELVKDKIETQIQVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGLGMPPMPPFGMPPMGSSY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccaacgctccgattgccatgcgagaacctctcaccttgccgagcattggc
ataaatccgcagttcatcaccttcacgcatgtgacgatggagtccgataagtatatatgc
gttcgagaaacggctccgcagaatagtgtcgttatcattgatatgaacatgccgatgcag
cctttgaggaggcctatcaccgcagattccgctcttatgaatccgaattccagaatcctt
gctctgaaagctcaactacaaggaacaactcaagatcacctacaaatttttaacattgaa
atgaaagcaaagatgaaatcttatcagatgcctgagcaggtggtcttttggaagtggatt
acccccaagttgttgggtcttgtgacacagacctctgtataccattggtcaatcgaaggt
gactctgaacccgtgaagatgtttgagagaacagcaaatttggcaaacaatcaaataatt
aattatcgatgtgatccatctgaaaaatggttggtcttgattggtattgctccaggttcc
cctgagaggccacaattggttaaaggaaacatgcaactcttctctgtcgatcaacagcgc
agccaggctcttgaagcacatgctgcagcatttgctcaatttaaagttcctgggaatgaa
aatccttctactttaatttcttttgccactaagacacttaatgctggtcaaattatatcc
aagttgcatgttattgagttgggtgcacagccagggaagccatcatttacaaagaaacaa
gcagatcttttctttcccccagattttgctgatgattttccagtcgccatgcagatatcc
cacaaatacaatttgatttatgtgattacgaaacttggtctcctatttgtctatgatttg
gagacagctacagctgtatataggaacagaataagtccagatcctatatttttgacatca
gaagctacatcagtgggaggcttttatgccattaacaggagaggccaggtgttattggct
actgttaatgagcaaacgattgtgaattttgtcagtggtcaattaaacaatttggagcta
gcagttaatctcgccaagcgaggaaatcttcctggggctgagaaactggtggtagaacgt
ttccatgaactgtttgcccaaacaaagtataaagaagcagctgagcttgctgctgagtct
ccacaaggaatccttcggacacctgatacagttgccaaatttcagagtgttcctgtgcaa
gctgggcaaactcctccactgttgcagtattttggaacacttctaactagaggaaagctg
aatgcctttgagtcattagaattgtcacggttggttgtgaaccagaacaagaaaaatctt
ttggagaattggttggcagaggacaagcttgaatgcagtgaagagctaggagatcttgta
aagactgtggacaatgatcttgctttaaaaatatacatcaaagccagagctactccaaaa
gttgttgctgcttttgctgagagaagagagtttgacaagattctgatatactctaagcag
gttgggtacacacctgattatctcttccttttgcaaacaattctccggaccgatcctcag
ggtgctgttaattttgcattaatgatgtcacaaatggagggaggttgcccagttgattac
aataccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttctc
ctagatgttttgaagccaaatctaccagaacatggtttccttcaaacaaaggtgttggag
ataaatctagttactttcccaaatgttgctgatgcaattttggctaacggcatgttcagc
cattatgatcgtcctcgtgttgcccaactttgtgaaaaagctggtctttatgtgcgagct
ttgcaacattacacagagttgccagatataaaacgtgtgattgtaaatacacatgcaatt
gagcctcagtcacttgttgaattttttggtactctgtcacgagaatgggcattagagtgc
atgaaagacctattgctggtcaatcttagaggcaacctacagattattgtacaggttgct
aaagaatattgtgaacaattaggcgttgatgcttgcataaagctttttgagcagttcagg
tcatatgaagggttatactttttcttgggatcatatttgagctccagtgaggatcctgac
attcactttaagtacattgaggcagcagcaaagactggacaaatcaaagaggttgagcgt
gtgactagagaatcaagtttctatgatcctgaaaaaacgaagaactttctaatggaagct
aagctaccagatgctcgacctctgataaatgtttgtgaccggtttggatttgttccagat
ctaacacactatctatacacaagcaacatgcttcgctacattgaaggttatgttcagaag
gtgaacccagggaatgctccattagttgttgggcagcttctagatgatgagtgtccagaa
gattttatcaaaggcttgattctctctgttcgttcattattgccagtggagccccttgtg
gaggagtgtgagaagaggaatcggcttcgtttgctcacacagtttttggaacatctggta
agtgagggaagccaggatgtacatgttcacaatgcactgggtaaaatcatcattgatagc
aacaacaatccagaacattttctcactaccaacccatactatgattctcgagttgtgggc
aaatattgtgagaaacgtgatcccaccttggcagttgtggcttataggcgtggacaatgt
gacgacgaacttattaatgtgacaaacaaaaattctttgttcaaactacaagcaagatat
gttgttgagaggatggatggtgatctttgggagaaagtgcttaaccctgataatgcgtac
agaaggcaacttattgatcaggttgtgtctacagctctgcctgaaagcaagagccctgaa
caagtatctgcagctgttaaggctttcatgactgctgatctacctcatgaattgattgag
cttctagagaagatagtgcttcagaattctgcattcagtgggaactttaatctgcagaat
ctgcttattttaacggcgataaaggctgatccctccagagttatggattatgttaacaga
ctggataattttgatgggcctgcagttggagaaatggctgttgaagctcaattatatgag
gaagcatttgcaattttcaagaagttcaacttaaatgttcaagcagtcaatgtcttgcta
gataatattcatagcattgatagagcggtggagtttgctttccgagttgaagaagatgct
gtttggagtcaggtggccaaggctcaactaagggaagggctagtaagtgatgcaattgag
tcatttattagagcagatgatgccacacagtttttggatgttatccgtgctgctgaagat
ggcaatgtttaccatgacttggtgaaatacttgctgatggtaaggcagaagacaaaagaa
cccaaggtggatagtgagctcatttatgcatatgcaaagatcgataggctcagtgaaatt
gaggagttcattcttatgccaaatgtagccaatcttcaaaatgttggtgaccgattgtat
gatgaagaactatatgaggctgccaaaatcatatttgcctttatatccaactgggccaag
ttagcagttacacttgtgaagttgaaacaattccaaggtgcagttgatgcagcaaggaaa
gctaacagctcaaaaacatggaaggaagtttgcttcgcatgtgttgatgcagaggagttc
cgtttggcccagatatgtggacttaacattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttgcttcaatgagttaatatccctcatggagagtggt
ttaggattagaacgggcacatatgggcatcttcaccgagttaggagttctgtatgccaga
taccgtcctgagaagcttatggagcatatcaaactcttttcaacccgcctcaatattcca
aaactcataagagcatgtgatgaacaacaacattggaaggagctgacctatctgtacatc
caatatgacgagtttgataatgctgctacaaccatcatgaaccattcacccgaagcatgg
gatcacatgcaattcaaagatgttgttgtcaaagttgctaatgtggagttgtattacaag
gctgttcacttctatttacaagagcatccagatcttatcaatgatgttctgaatgtcctt
gcacttcgtgttgatcatgcacgtgttgttgacatcatgcgaaaggctggtcatctccgt
cttgtcaagccatacatggttgctgttcagagcaacaacgtgtctgctgttaatgaagcc
ctgaatgaaatatatgttgaggaggaggactatgatagattgcgtgagtcaattgatttg
cacgataactttgaccaaataggccttgcacagaagattgaaaagcatgagcttcttgag
atgagacgtgttgctgcttatatttacaagaaggcaggtagatggaagcagtccattgcc
ttgtcaaagaaggataacctttacaaagatgccatggagacggcgtctcaatctggtgac
cgtgaacttgctgaggagttacttgtttatttcattgatcagggaaagaaggaatgcttt
gcctcgtgtctatttgtctgctatgatttgatccgggcagacattgttcttgaattggct
tggatgcacaatatgattgatttcgccttcccatatctattgcagtttatccgtgagtac
actggcaaagttgatgaactggtgaaggacaaaattgaaacacagatccaagtgaaggct
aaagagcaagaagagaaggaagtaattgctcaacagaatatgtatgctcagttgttgcct
cttgctttgcccgcaccaccaatgcctggaatgggaggaggctttgctcctccccctcca
atgggtggattgggaatgcctccaatgcctccttttggtatgccacccatgggcagcagc
tactga
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integrated database retrieval system
