Cajanus cajan (pigeon pea): 109810337 Help Entry 109810337         CDS       T04868                                  Name (RefSeq) protein STABILIZED1   KO K12855   pre-mRNA-processing factor 6 Organism ccaj  Cajanus cajan (pigeon pea) Pathway ccaj03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccaj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109810337  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ccaj03041]     109810337 Spliceosome [BR:ccaj03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     109810337  Complex C    U5 SnRNP specific factors     109810337 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 HAT_PRP39_N TPR_19 Suf HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_16 HAT_Syf1_CNRKL1_C ubiquitin PAP_PilO PMC2NT Motif Other DBs NCBI-GeneID:  109810337 NCBI-ProteinID:  XP_020229361 LinkDB All DBs Position Unknown AA seq 1041 aa AA seqDB search MVFVVSPNHKTFAIDLNPNTTTLHLLKLSIQQTLTIPISHQRLFLSHSRRLTADNDAAGD SLLISDLGVGPYSTLTLHVPFFGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR SDIGPARAAPDLPDRSATTIGGTAGAGRGRGKPGEDEDDDEGEDKGYDENQKFDEFEGND VGLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADL KRKLYTLSSDDWQSLEKFESGGYSSRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKS RAANGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKI TSDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIQRGCEECPKN EDVWLEACRLANPDEAKAVIARGVKAIPNSVKLWMQASKLEHDDVNRSRVLRKGLEHIPD SVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLPK EPSIWITAAKLEEANGNTSMVGKIIERGIRALQREGLVIDREAWMKEAEAAERAGSVVTC QAIIHNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQ LEKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSE EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERKLLDEGL RQFPSFFKLWLMLGQLEEQLAENAKRLDQPEKRFDHLKEAKKVYESGLKNCPNCVPLWLS LANLEEEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGYKKEADILMAKALQECP NSGILWAASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAV TLAPDIGDFWALCYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTES ILKKVVVAHGKEENAADNNKH NT seq 3126 nt NT seq  +upstreamnt  +downstreamnt atggtgtttgttgtatcacctaaccacaaaaccttcgccatagacctaaaccccaacacc accacactccacctcctcaaactctcaatccaacaaaccctaaccattccaatttcccac caacgcctcttcctctcccacagtcgccgattaaccgccgacaatgacgccgccggtgat tcccttcttatctccgatctcggcgtcgggccctactccaccctgaccctccacgtcccc ttcttcggcggcaccaaccctccggcggttcccaaaccccgcttcgatttcctcaactcc aagccccctcccaactacgtcgccggtctcggccgtggcgccaccggcttcaccacacgt tccgatatcgggcccgcccgcgccgcgccggacctccccgaccgctccgccaccaccatc ggcggcaccgccggtgccggcaggggacgcgggaagcccggcgaggatgaggacgacgac gagggcgaggacaagggctacgacgagaatcagaagttcgacgagttcgaagggaacgac gtgggattgttcgcctcggcggagtacgacgaagacgacaaggaagccgatgccgtttgg gaagccattgataagagaatggattcgcggcggaaggatcggagggaggcgaggttgaag caggagattgagaagtaccgtgcgtcgaaccctaaaatcacggaacagttcgctgatttg aagaggaaattgtacacgctttcttcggatgattggcagagtcttgagaagtttgagagt gggggttattcttctaggaataagaagaagaggtttgagagttttgtgcctgtgcctgat actcttcttgagaaggcaaggcaggaacaagagcatgtgacagctttggatcctaagagt agggctgctaatgggactgagaccccttgggcacaaaccccggttactgatttaactgct gttggtgagggtagagggactgtgttgtctttgaagttggataggttgtctgattcggtg tcggggatgactaatgtggatcccaaagggtatttgactgtgttgaatagtatgaagata actagtgatgctgagatttcggatttcaagaaggctaggttgttgcttaagagtgtcacg cagacgaatccgaagcacccgccgggttggattgctgccgcgcggttggaggagttggcg gggaagcttcaggtggcgaggcagttgatacagagagggtgtgaggagtgtcccaagaat gaggatgtgtggctggaggcttgtaggctggcaaatccggatgaggcaaaggctgtgatt gcgcggggtgttaaggcgattcccaattcggtgaagctgtggatgcaggcttcgaagttg gagcatgatgatgtgaacaggagtagggttttgaggaaggggttggagcacattcctgat tcggttaggctgtggaaggctgttgtggagcttgctaatgaggaggatgctagacttttg cttcacagggctgtggagtgttgtcccttgcatgttgaactctggcttgcgcttgcgagg ttggagacttatgacaatgctaagaaggttcttaatagggcgagggagaggctgcccaag gagccttctatatggataacggctgccaagttggaggaagctaatgggaatacttccatg gttggaaagatcattgaaaggggtataagggctttgcagagggaaggtttggtgattgac agggaagcttggatgaaggaagcagaggccgcagagcgtgctgggtcggttgtaacttgc caagcaataatccataatactattgggattggagttgaagaagaagataggaagaggaca tgggttgctgatgcagaggaatgtaagaaacgaggatccattgagactgccagagctatt tatgctcatgccttgactgtcttcttaactaagaagagcatatggctcaaagcagcacag ctggaaaagagtcatggtaccagggaatcacttgatgcattacttcgtaaagcagttacc tacagaccgcaggccgaagttctttggcttatgggtgccaaagagaagtggcttgctgga gatgtgcctgcagctcgtgctatcctccaagaagcttatgctgccattcccaattctgag gaaatatggcttgctgctttcaagctggaatttgaaaaccatgaacctgagagagctagg atgttgttggctaaagccagagagagaggaggtacagaaagagtctggatgaaatcagcc attgttgagagagaactagggaacattgaagaggagagaaaattgttggatgagggtctg aggcaattcccttcattctttaaattgtggttgatgcttggccagcttgaggaacagctt gcagagaatgcaaagcggcttgatcagcctgagaagcggtttgatcacttgaaggaagct aagaaggtctatgaatctggacttaaaaactgtcctaattgtgtaccactttggctctct cttgctaatctcgaagaggagatgaatggactgagtaaggctcgtgcagttctcactatg gctcggaagaagaatcctcaaaaccctgaactctggcttgctgctgttagagcggaattg aagcatggatataagaaagaagctgatattttgatggccaaggcattgcaggagtgtcct aatagtggtattctgtgggcagcatcaattgagatggttcctcgtccccagcggaaaacc aagagcatggatgccctcaagaaatgtgaccatgatccccatgttattgctgctgtggcc aaattattctggcatgataggaaggtggacaaagctaggacttggctgaatagagctgtg acactagctcctgacatcggggatttctgggcattgtgctacaaatttgaactgcagcat ggaactgaggagaaccagaaggatgtgttgaagagatgtatcgctgctgaaccaaaacat ggagagaaatggcaagcaatctcgaaggcagttgagaactctcatcaaccaaccgaatcc atcttgaagaaagtagtggttgcgcacgggaaggaagagaatgcagctgacaataataaa cattga

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