KEGG   Cajanus cajan (pigeon pea): 109810696
Entry
109810696         CDS       T04868                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03018  RNA degradation
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109810696
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109810696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109810696
   03041 Spliceosome [BR:ccaj03041]
    109810696
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109810696
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109810696
Spliceosome [BR:ccaj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109810696
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 109810696
NCBI-ProteinID: XP_020229823
LinkDB
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcgggcagaaaagaaacggttctggaccttgcaaagtttgtagacaaaggcgttcaa
gttaagcttactggtggcagacaagtgacagggactctaaaagggtatgatcagttgctt
aaccttgtcctagatgaagctgtggagtttctaagagatgctgatgatcctctgaaaact
accgatcaaaccagacagcttggcttaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgagatcgccaacccctttatacagccagatggggcctaa

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