Cajanus cajan (pigeon pea): 109810890
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Entry
109810890 CDS
T04868
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B isoform X2
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04120
Ubiquitin mediated proteolysis
ccaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109810890
04120 Ubiquitin mediated proteolysis
109810890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109810890
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109810890
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109810890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109810890
NCBI-ProteinID:
XP_020230081
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MRLKTYAGLSLIATLAIIYHGFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQLT
KKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQ
KRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYSSLKHLIETWQASVSLFFCFEYMI
LATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFVNYGI
PLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTT
AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTPVAVGQQGSQSDSHRQGTGTG
TGSAAQTEATDNVSRHQARLQAAAAAASIYEKSYVYPSANSFVCSPGYTLYPPVQIPTAE
SASTDRSGEQTSSEQALRQFLIPGGPTNVSFPMMQQFHFLPSQTYAAPVNYGEGFENDPN
IPSSPLEAQKKLLQCQIQILQNQLEILQRTKADKSVDEGTSSSDSRGKSIASSSSESGNG
YREVIQDGKA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcaagacttatgcgggccttagtttgattgcaactttggctattatttatcat
ggatttaacagcaggggccagttttatccggcaatggtgtatctctcgacttccaagatc
agtttggtgcttcttctcaacatgggtttggtcattatgtgcattttatggcaattaacc
aagaaggtgttcttgggttcccttcgtgaggcagaggttgagaggcttaatgagcaatcg
tggagggaggtcatggaaatcctctttgcaattactatttttaggcaggacttttctgtg
acatttcttgccatggtaacagcgttgttgttgattaaggctttgcattggttggctcaa
aagagagtcgagtacatcgagacgactccttcagtgcccatgttgtcacatgttcgaatt
gtatctttcatgggtttcctccttcttctagatagccttttcttatacagttctttgaag
catttgatagaaacttggcaggcttcggtttcactgttcttttgttttgagtacatgata
ctggcaactacaactgtgtcaatatttgtaaaatatctcttctacgtcagtgacatgcta
atggagggacagtgggaaaagaaaccagtcttcacattttacctggaactgattagggac
ttgcttcacttgtctatgtacatgtgcttcttccttgtaatttttgtaaactatggtatt
cccttgcacctaatacgggagctgtatgagacgtttaggaacttcaaagttcgtgttgca
gattacatacgatatcgtaaaattacttcaaatatgaatgatcggtttccagatgcaacc
cctgaagagcttaatgcaagtgatgcaacctgcattatctgtcgtgaggagatgactacc
gccaagaaacttatatgtgggcatctttttcacgttcattgtctccgatcatggctggag
cggcagcatacttgtcccacctgcagagccttggttgtaccaccagaaaatggaacacct
gtagctgtagggcagcaaggatcacagtcagacagtcatcgtcagggaactgggacaggc
actggaagtgcagctcaaactgaggctactgataatgtgagtcgacatcaagccagactc
caagctgctgctgctgcagcttcaatatatgagaagtcttatgtgtacccctctgcaaat
tcttttgtgtgctctcctggatacactctttatcccccggttcaaatacctactgcagaa
tctgctagtacagatcgtagtggagagcaaacttccagtgaacaagcattaagacagttt
cttatccctggtggaccaacaaatgtatcctttcctatgatgcaacaattccattttcta
ccttctcaaacatatgcagcccctgtgaattatggagaggggtttgagaatgatccaaac
atcccaagctctccgctggaagctcaaaaaaaacttcttcaatgccagattcagattctg
caaaatcagctcgagattctgcagaggacaaaggctgataaaagtgtagatgagggtaca
tcctcatcagatagcagaggcaagagtatcgcttcctcatcatccgaatctggtaatggt
tatcgtgaggtgattcaagatggaaaagcatga
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