Cajanus cajan (pigeon pea): 109811285
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Entry
109811285 CDS
T04868
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109811285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109811285
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109811285
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109811285
Coactivators
SAGA/TFTC/STAGA complex
109811285
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109811285
STAGA complex
109811285
TFTC complex
109811285
SAGA complex
109811285
SLIK complex
109811285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Histone
CCDC47
Motif
Other DBs
NCBI-GeneID:
109811285
NCBI-ProteinID:
XP_020230567
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSFVPKETIEVIAQSIGITNLSSDVALALAPDLEYRIREIMQESIKCMRHSMRTCLTTDD
VDTALALRNLEPIYGFTSSDPLRFKRAAGHKDLFYIDDKDVEIKDLIEAPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPVEAPPEIRKSEYKEDGPIDVKLPVKHLITRELQLYYEKITE
LTLNKPGSIPFRRALISLAADSGLHPLVPYFTCFVADEVARNLNNFAVLFALMRLVRSLL
QNSQIHIELYLHQLMPAIITCIVAKKIGNRLSDNHWELRNFSANLVASICQRFGHVYHNL
QSRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRVIRLLILPNLEPYLHLLEPEMQPEK
QKNEIKRNEAWRVYGALLGAVGQCTYEKVKMFTSLLSPTTRVTSRGNGKAMIAMSGKRKA
SADNLMQQQQQPPLKKLAADGPGGVVPMNSMSDMQGSTGGFSTMMGVPSMSMARQLSNDS
AQGREVGGDQQRKVSSTLAQAWKDDIDAGNLVSSVVELFGESVLPFVPNPEACMFL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtgccaaaggagacaatcgaagtcattgcacagagcattggcatcaccaac
ttatcctccgatgttgccctcgctctcgctcccgatctcgaataccgcattcgcgaaatc
atgcaggagtcgataaaatgcatgcgccattcgatgagaacttgtcttactacagatgat
gtggatactgcacttgcattgagaaatttagagccgatatatgggttcacctctagtgat
cctctgcggttcaaaagagctgctggacataaggatttgttttacattgatgacaaagat
gtggaaattaaagatctaatcgaagctcctttaccaaaagcaccccttgatacatcaatt
accagtcactggttggctattgaaggtgttcagcctgcaatccctgaaaatgctccagtt
gaagctccccctgagataagaaaatctgaatataaggaagatggtcctattgatgttaaa
ttacctgttaaacatttaataacaagggagcttcagctttactatgagaaaataactgag
ctaactttaaataagcctggatccattccttttagaagagcattgattagcttggcagca
gactcgggactccatcccttagttccatatttcacatgctttgttgctgatgaggtggca
cgaaatttaaataattttgctgttttgtttgccttgatgcgccttgtgcggagccttttg
caaaattctcagatacatatagaactttatttacatcaattgatgccggctatcattact
tgcattgttgcaaaaaagataggaaacagactatctgataatcactgggagcttaggaac
ttcagtgctaatcttgttgcttcaatatgccaaagatttgggcatgtttatcacaatctt
cagtcacgtgtgacaaagacatttcttcattctttcttggaccctacaaaagctctgccc
caacactatggtgcaattaaaggaatagaagcccttgggtcaagagtgattcgcttgctt
atacttccaaatctcgagccatatttgcatcttcttgagccagaaatgcaacccgagaag
caaaaaaatgaaattaagaggaatgaagcttggcgagtttacggagccttgctgggtgca
gtaggtcaatgtacgtatgaaaaggtcaaaatgttcaccagtttgctctctcctacaact
cgtgttacttcaagaggcaatggaaaagccatgattgcaatgtcagggaaacgaaaagcc
agtgcagacaatctaatgcagcagcagcagcaacctccactgaagaaacttgcagcagat
ggccctggtggtgtggtgccaatgaactccatgtcagacatgcaaggttcaacaggtgga
ttttccaccatgatgggggttccttccatgtcgatggctcgccaattatccaacgacagc
gcgcaggggagagaggttggaggagaccaacaaaggaaggtgtcttccactcttgctcag
gcttggaaggatgacattgatgcaggaaatttggtgtcatcagtggttgaattgtttggt
gaaagtgtcttgccatttgttccaaaccctgaagcatgtatgtttttgtag
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