Cajanus cajan (pigeon pea): 109811329
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Entry
109811329 CDS
T04868
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ccaj03012
]
109811329
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109811329
Translation factors [BR:
ccaj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109811329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
HA2_C
DEAD
Helicase_C
HA2_N
DSRM_DHX29
AAA_22
nSTAND3
DND1_DSRM
AAA_19
PhoH
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
109811329
NCBI-ProteinID:
XP_020230623
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MAPKKNKQRAKAQSGPKLQISAENENRLRRLLLSSARPTPANVTSTDDTQTKAQKAKKLK
AVYEKLSCEGFSNHQIELALSALREGATFESALDWLCLNLPGNELPLKFSTGTSHYNQGG
SVGVISNQPDNSTPSVDPSITAKEEALESPVLIKRQLSDDTLDSCLPSQADWIRQYVEQQ
EKDEYETWEDDIFDLSSATKKPCEPRSYDVIAKEYLAARLEATKAKKERDKKRQEQAGHI
IRKLKQELSALGLSDDNLALEHEHEISFKFKSERASMGHEPVDCFKEKTPCHTEGLASDE
TAVGGSDVEGHSMVEHLVKSGSPVAHVEKNSAEGEVGDVELGGFFLEDVPSCEILPPDIL
KVQKQEKIKRASEKNLDKLDGIWKKGDPQKIPKAVLHQLCQKLGWEAPKFDKVFGRGKNY
SYTVSIVRKASGRGKNRKAGGLVTLQLPDQNETVESAEDAQNKVAAYALYKLFPDIPVHL
PITEPYALLIIKWMEGESSTNLEDTEKDHRSGFVDSLLDDNSSSATASVDVADYKCPQNF
GRLHDNESSTIACHQQFSQRETYIKEMESADLRQRQQIKMRTQRYQDMLKIRATLPIAAL
QGDMLQLMKEHDVLVVCGETGSGKTTQVPQFILDDMIESGNGAYCNIVCTQPRRIAAISV
AERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLMGDQSLSSITHI
IVDEVHERSLLGDFLLIVLKNIIEKQSTKSSGKLKIILMSATVDSSLFSRYFSNCPVVTA
EGRTHPVTSYFLEDIYDQLEYRLASDSPASLTNGIFPKRQILQRDVVTNNRGKKNLVLSA
WGDESLLSEEHVNPYFVPSYYQLYSEQTQQNMKRLNEDVIDYDLLEDLICFIDETCDEGA
ILVFLPGMSEINCLHDKLVASCQFGGPSSEWVIPLHSSVASSEQKRVFLRPPGNIRKVVI
ATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLSSMVEDWISQANAMQRRGRAGRVKPG
ICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGYIKPFLSEALEPPKVEAMD
SAISLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAMFGCLSPILSVAAFLSYK
SPFVYPKDERQNVERAKLTLLNDKLDGPSNTNDIDQQSDHLLMMTAYKRWERILTEKGTK
AAQQFCNSFFLSSSVMFMIREMRIQFGTLLADIGLITLPKDYQMHGKKIGSLHSWLSDAS
QPFNKYAQHSSILKAILCAGLYPNVAATEQGIVAAALSSLKQSSSSANSGRTVWFDGRRV
VHIHPSSINSNSKGFQFPFLVFLEKVETKKVFLRDTSVISPYSILLFGGSINVQHQTGLV
TIDGWLKLTAPAQIAVLFKELRLALHSILKELIKKPENATVLNNEIIKSIITLLLEEGSM
PQ
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaaaaagaacaagcagagggcaaaggcgcaatcaggtccgaagcttcagatt
tcggcggaaaatgagaaccgcctccgccggctcttgctcagctcggcccggcctacccct
gcgaatgtgacttcgacggacgatacccaaaccaaagctcagaaggcaaagaagctcaaa
gccgtttacgagaagctctcttgcgaaggtttctctaatcatcaaatcgaactcgctctc
tctgctctcagggaaggtgctacgtttgaatcagctcttgattggttatgcttgaatttg
ccggggaatgaacttccgctcaagttttctactggaacatctcattataaccaagggggt
tctgttggtgttatatcaaatcaaccggacaattcaactccgtcagtggatccatctatt
acagccaaggaagaagctctagaatctccagttttaatcaagagacagttgagtgatgat
actttagattcttgtctcccatctcaagcagattggatccggcaatatgtggagcaacag
gaaaaggatgaatatgagacttgggaagatgacatttttgacctaagtagtgccacaaag
aagccctgtgaacctaggtcatatgatgttattgctaaggagtatctcgctgcaaggttg
gaagctacaaaagccaagaaagaaagggacaagaaacgtcaggagcaggcaggccatatc
atccggaaactgaagcaagagttgtctgctctaggattatctgatgacaatttggcctta
gaacatgagcatgaaatcagttttaagtttaaatctgagagagcatccatgggtcatgag
cctgttgattgctttaaagaaaaaactccatgtcatactgaaggattggcttctgacgaa
acagcagttggtggaagtgatgtggagggacatagcatggtggaacatcttgtgaagtct
ggttcaccagttgcacatgtggaaaaaaattcagctgaaggagaggttggagacgttgag
cttggtggtttcttcttggaggatgttccatcttgtgaaatattacctcctgatattttg
aaagtacaaaaacaagaaaaaattaaaagagcatctgagaaaaatttggataaattagat
ggcatttggaagaagggggaccctcaaaaaattccaaaggctgttcttcatcaactatgc
cagaaattagggtgggaggctccaaagttcgataaagtttttggtagaggaaagaattac
tcctatactgtaagtatagtgcgtaaagctagtgggaggggcaagaatagaaaagctggg
gggttggtcacacttcaattgccagatcagaatgaaactgttgaatctgctgaggatgca
cagaataaagtggcagcatatgctttgtacaaactgtttcctgatatcccagttcatctc
ccaattacagagccttatgcattgcttattataaagtggatggaaggggaatcatcaacc
aatctagaagacactgagaaagatcatagatctggttttgtggattcattattagatgat
aatagttccagtgcaaccgcatctgttgatgttgcagattataagtgcccccagaacttt
ggtagactccacgataatgagagttcaaccattgcctgtcatcaacaattttctcaaaga
gaaacctatatcaaggaaatggagagtgctgatttgcgacagcgacaacaaattaaaatg
agaacacaaagataccaggatatgttgaaaatcagagctacacttcctattgctgctcta
cagggtgatatgttacaattgatgaaggaacacgatgttcttgttgtttgtggggaaaca
ggctctggaaagacaactcaggttccacaatttatattggatgacatgattgagtcagga
aatggtgcatactgtaatattgtttgcacacaaccacggagaatagcggctatttctgtg
gctgaaagggttgcggatgagcggtgtgaaccttccccaggttcagatggttctttgatt
ggttatcaagttcgtcttgatagtgccaggaatgaaaaaacaaggcttctcttctgcaca
acaggcatccttctaagaaaattaatgggggaccaaagcttgtcaagcattactcatatc
atagttgatgaagttcatgagaggtctttattgggtgattttcttcttattgttttaaag
aatataattgagaagcagtccactaaaagctctggaaaactgaagatcattctaatgtct
gcaactgttgattcaagtttattttcaagatacttcagcaattgtcctgtagttactgct
gaaggcaggactcatccggtgacatcatactttcttgaggatatatatgatcaacttgag
tatcgacttgcctcagattctccagcttctttaacaaatgggatttttcccaaaagacag
attttgcagagagatgttgtgacaaataacaggggtaagaagaatctagtcttatctgca
tggggtgatgagtctctgctttctgaagaacatgttaatccatattttgttccgagttat
tatcaattatatagtgaacaaactcagcaaaatatgaaaagattgaatgaagatgtcatt
gattatgatcttcttgaagatctgatatgtttcattgatgaaacttgcgatgagggtgcc
atccttgtattcctacctggaatgtctgaaataaactgcttacatgataagttggtggca
tcttgccaatttggtgggccatcttctgaatgggttattcctttgcattcatcagttgca
tcaagtgaacaaaaaagggtgtttttacgccctccaggaaatatacgtaaggttgttata
gccacaaatatagcagagacaagcataacaatagatgatgtgatatatgtaattgactgt
ggaaagcataaagagaaccgctacaatcctcaaaagaaattgtctagcatggttgaagat
tggatttctcaagcaaatgcaatgcagcgtcgtggtagagctggacgtgtaaaacctgga
atttgcttttgcttgtacactcgtcatagatttgaaaagctcatgcgtccatatcaggtt
ccagagatgcttcggatgccattagttgaattgtgcctgcagattaagttactgtctctt
ggatatatcaagccatttttgtccgaggcattagaacctccaaaggttgaagcaatggat
tcagcaatatctttattgtatgaggtcggtgctcttgaaggggatgaagagttgacacct
ctcgggcatcatctggcaaaacttcctgtggatgtattaattgggaagatgatgctgtat
ggtgcaatgtttggttgtttgtctcctattctttcagttgctgcatttctgagttacaaa
tctccatttgtgtatcctaaggatgagaggcaaaatgttgagagagcaaaattgacactg
ttgaatgataagctagatgggcctagcaacacaaatgatattgatcagcaatctgatcac
ttactgatgatgacagcctataaaagatgggaaaggattttgactgagaaaggaactaaa
gctgcacagcaattctgcaattcatttttcttaagcagctctgtaatgtttatgataagg
gagatgaggatacagtttggaactttgctggctgacattggtctcatcactcttccaaaa
gattatcagatgcatgggaaaaagatagggagtcttcacagttggctttctgatgcatca
caaccatttaataaatatgcacaacattcatcgattcttaaggctatactatgtgcaggt
ttatatcccaatgtagcagctactgaacaaggcattgttgcagcagctctcagcagcctt
aagcagtcttctagctctgcaaattctggacgtacagtctggtttgatggaagaagagtg
gttcatatccacccttcttcaatcaacagcaactcgaaaggattccagttcccctttctt
gtcttccttgagaaggttgaaacaaagaaagtatttcttcgagatacttcagtcatatct
ccatactctattttgctttttggagggtcaatcaatgtccagcatcagactggactggtc
accattgatggatggttgaaattgactgcacctgcccaaatagctgtcttgttcaaggag
ctacgattagctctccattccattctgaaggagcttattaaaaagccagagaatgcgact
gttctgaataatgagatcattaaatctatcatcactctgcttttggaagaaggaagcatg
cctcaatga
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