Cajanus cajan (pigeon pea): 109811499
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Entry
109811499 CDS
T04868
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109811499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109811499
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109811499
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109811499
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109811499
PBAF complex
109811499
GBAF(ncBAF) complex
109811499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109811499
NCBI-ProteinID:
XP_020230853
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSVNNNNPSKGIGASSSSFGNAGIPSNSIPGNPGFSQSQAQAQIPVGFQGQFPLSQAHAI
VQAQSKAQAQAQAHAQAAAAAHAQLQAHLQAQGLSLNQSQAGGLGSLGVSSPSVSMPGNL
SGKRIPLKPPIRPVGFSPPNSFSPLRPMELTPASRRKKQKLPEKQLQDKVAAILPESALY
TQLLEFESRVDAALVRKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAEPPT
WTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIIMWENAR
SPAPQEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHY
VKARKLQNPNDPSYFHCDQPLQKVFGEEKMKFTMVSQKISSHLFPPQPILLEHKIKLSGN
SPVGTACYDVMVDVPFPIQRELSALLANVEKNKEIETCDEAICGVIRKIHEHRRRRAFFL
GFSQSPVEFINALIESQSRDLKLVAGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAA
GSDAPGST
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacccttctaagggcattggagcctcttcctcatcctttggc
aatgccggaataccctccaattctatacctggaaaccctggtttttcacagtcccaagcc
caggcccagattcctgttggttttcaagggcagtttccactgtcccaagcccatgctatt
gtccaagctcagtccaaggctcaagcccaggctcaggcccatgcccaagcagctgcggct
gctcatgctcaactccaggctcatttgcaagctcaggggttgagtcttaatcagagccag
gctggtggtttggggagtttgggggtgtcgtcgccttcggtttcgatgccaggcaacctc
agtgggaaacggatccctctgaaaccgcccattcggcctgttggattttcccctcccaac
agcttctcgcccttgagaccaatggagctcacacctgcctcgcggaggaagaagcagaag
ctccctgagaaacaactgcaagataaagtggctgctatactgcccgagtctgcgctgtat
acacaacttcttgagtttgagtctcgtgttgatgcggcacttgttagaaagaaggctgac
atccaggaagcgctaaaaaatccgccttgtattcagaaaactcttcgaatctatgtgttt
aacactttcgctaatcaaattcgcacgattccaaagaagccaaatgcagagcctccaacc
tggacgctgaagatagttgggaggatattggaagatggtgtagatcctgatcagccgggt
gtagttcagaagtcatctcctttgtatccaaagttttcagctttcttcaaaagagtaacc
atttctttggatcagagattgtatcccgataatcacattattatgtgggagaatgctcga
tcacctgctccacaagaaggtttcgaagtaaagaggaaaggggataaagaattttcagta
aatatacggctggagatgaattatgtgccagagaaatttaagctttcaccagctttgaca
gaagttcttggtattgaggttgatacccgtccgagaattgttgctgcaatctggcactat
gtgaaggccaggaaattgcaaaacccaaatgacccttcttactttcactgtgatcagcca
cttcagaaagtattcggagaagaaaaaatgaagtttacaatggtttcgcagaaaatatca
tcgcatttgttccccccacagcctatacttttggagcacaaaatcaagctctcgggaaac
agtccagttgggactgcttgttatgatgtgatggttgatgttccttttcctattcagagg
gagctgtctgctttattggctaatgtggaaaagaacaaagagattgagacatgtgatgaa
gcaatatgtggagtcattagaaaaatccatgagcaccgtaggagacgggcattctttctt
ggttttagtcaatcgccagtagaattcattaatgctttgattgaatctcaaagcagggat
ctgaaactcgtagctggagaacctagtcgtaatgcggaaaaagagcgtcgatctgatttc
ttcaaccaaccctgggttgaagatgctgttattcgttacctgaatcgcaaaccagccgcc
ggaagtgatgctccaggaagcacatga
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