Cajanus cajan (pigeon pea): 109811536
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Entry
109811536 CDS
T04868
Name
(RefSeq) homeobox-DDT domain protein RLT1
Organism
ccaj
Cajanus cajan (pigeon pea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WSD
HARE-HTH
DDT
WHIM1
gag_pre-integrs
Phage_zn_bind_3
Motif
Other DBs
NCBI-GeneID:
109811536
NCBI-ProteinID:
XP_020230889
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MERQDRERRKEEERLIREKQREEERSKREQRREMERREKLLLKEHLRAEKKRLKEEIRKE
KEEERKKAALEKANARRMAKESMELIEDEQLELMELAAASKGLSSIIHIDLDALQNLESF
RDSLCVFPPKSVKLRKPFAIQPWINSEQNVGNLLMVWKFLITFADVLELWPFTIDEFVQA
FHDYDRSTGQSIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMDSRL
LGEIHVALLKVIIKDIEDVARTPSTGIGMNQNGAANPGGGHPLIVEGAYAWGFDIRNWQK
NLNQLTWPEIFRQLVLSAGLGPQLKKRNITWSYAIDKDEGKSCEDIISTLRNGSGAESAV
AKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGLRDLTTSK
TPEASISVALTRDTKLFERIAPSTYCVRTAFRKNPSDAENILSEARKKIQIFENGFLAGE
DADDVEREDESESDEVDEDPEDDDLVNPSSANQNSEQYVDTNICSSNGKENLGHNVDLIQ
NEFDTDLPCFLKNVSTDADCLSSVTRQPVACEDLNAGNLVQDNMEIDESKSGESWILGLA
EGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLESANALKKQMWAEAQIDKVRLKD
DIIGKSDFPSLTGNKVETQYTYPAVGDNQSPMLDININNINNEASPSTAENQKGAPVSQN
MPMEKSSSIQDLGTGTCADIPHTQVPAQYSKRSRSQLKSYIAHMAEEMYVYRSLPLGQDR
RRNRYWQFVASASSNDPGSGRIFVEYHDGKWRLIDSEEAFDALLTSLDSRGIRESHLRLM
LQKIENSFKENVRKKNARCAKNGSRGEVSVKIEANETYSIPDHNAGSDSPSSTLHDLNPD
ISETSSSFKIELGKTECEKKSAWRRYQDFQKWLWKECYNSSVLCAMRYGIKRCKPQMDIC
DACLNPYFVEDSHCNSCHRTFPSNTGFNFSKHAFQCRDKLSKDDCFLEYSLPLRTRLLKV
LLAFMEVSVLSEAFGTSWTDDMRKHWGVKLSKSSSVEELLQILTLFERAIWRDFLSSNFS
TTDELLGLSSMSESFVQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYGKFEEHEPC
EEKEAREYIKLPSRYAHTKSNREVEPAEFDHIEFTKDKSVHKKIVRSGNKRGRGASEQGR
GKKLAKRVYNSKRDGGRKNAKVTENLSHKLKHQARRTQGQGAGRGRSVRKPRVGKRAVED
LLLGHTTASHSSRIDREPLRNFDEEWDGEKASPMTPVHIGVVDNSNSAEEVESDDDNAQA
VEYDQGNWEVGFNGVPSNRWSRDLVGMSDEDVDAFEDDNDNENGIEENELEDSEADVMSE
GSDGIANRVVNVGGSDSALSEDSSD
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcaagatcgtgaaagaaggaaggaagaagagaggttgatacgtgagaaacaa
cgagaagaggaaagatcaaagcgtgagcaaagacgggaaatggaacgaagggaaaaatta
ttgttgaaagaacatttaagagccgagaaaaagaggctaaaagaagagattcgcaaggag
aaagaggaagagaggaagaaagctgcccttgagaaggcaaatgctcgtagaatggctaaa
gaatctatggagcttattgaggatgaacagttggaattgatggagttggccgctgcaagc
aaggggctttcttctattattcatattgatcttgatgctttgcaaaaccttgaatcattt
agggattcattgtgtgtatttccacccaaaagtgtaaagctgagaaagccatttgccatc
caaccctggattaactcagaacagaatgttggcaaccttctcatggtttggaaattcttg
attacttttgctgatgtccttgaattatggccttttactattgatgagtttgtacaggca
tttcatgactatgaccggagtacgggacagtcgattggagctggatctgaatcacatggt
ctctactaccttcagccttctacctctaccatatgtgcatctattgagtctcctggttta
atccatcgtcgcctgggtcatccaagcttgaataaattaaagaaaatggattctagattg
ttgggtgagatacatgttgctctgctcaaggtgataataaaagacattgaagatgttgca
aggacaccttctacaggaatagggatgaaccagaatggagccgctaatcccggaggtggg
catccattgattgtggaaggagcatatgcatggggctttgatatacgaaattggcagaag
aacttgaatcagttgacatggcctgaaattttccggcagttagtactatctgcaggatta
ggaccgcagctgaagaaaagaaatattacatggtcctatgcaattgataaagacgaggga
aaaagttgcgaagatatcatttctacactccgtaatggttcaggagctgaaagtgccgtg
gccaaaatgcaagagagaggtctgttagctcctcgaagatcaaggcacaggttaactcct
ggaacagttaaatttgcagcttttcatgttctctcacttgagggtagtaagggtttgaca
gtactagagcttgcagataaaatccagaaatctggtcttcgggacttgacaaccagcaag
acacctgaagcatcaatttctgttgctttgacaagagacactaaattgtttgaaagaata
gctccatcaacatattgtgtacggactgctttcaggaagaatccttctgatgctgagaac
attctttcagaagcaagaaagaaaattcaaatatttgaaaatgggtttctagctggtgaa
gatgctgatgatgttgagagagaagatgaatcagaaagtgatgaagttgacgaggatcct
gaagatgatgatttagtaaatccttcaagtgcaaaccaaaattctgaacagtatgttgac
acaaacatttgctcatcaaatggaaaagaaaatttgggtcacaatgtagatcttattcaa
aatgagtttgatacggatctaccttgttttcttaagaatgtttctacagatgctgattgt
ctcagttctgtcactcgacaacctgttgcttgtgaagatttaaatgctggaaatcttgtt
caagataatatggaaattgatgaaagcaaatcaggagagtcctggattctagggcttgct
gaaggagaatattctgatctcagtgtagaggagcgtctaaatgctcttgtcgtgttggtt
ggtgtagcaaatgaaggaaattcaatccgtgttgttcttgaggatcgactggaatcagca
aatgctctgaagaaacaaatgtgggcagaagcacagatagataaagttcgtctgaaagat
gatattattggtaaatcagattttccatcacttactgggaataaggttgaaacacaatac
acatatccagctgtgggggacaaccaaagcccaatgcttgacattaatattaacaatatt
aataatgaagcatcacccagcactgcagaaaaccaaaagggagctcctgtttcacagaac
atgcctatggagaagtcctcgtcaattcaagatcttggcacgggtacttgtgcagacatc
cctcatactcaggtacctgcacaatattcaaaaagatcacgttcacagttgaaatcttat
attgcccacatggcagaggagatgtatgtttacaggtctttaccccttggccaagatcgc
agacgaaatcgatattggcagtttgttgcttctgcttccagcaatgatcctggttctggc
aggatctttgttgaatatcatgatgggaagtggaggcttattgattctgaagaggccttt
gatgctcttttgacgtcattggattctcgcgggatcagggaatctcatttgcgcttgatg
ttgcaaaagattgagaattcctttaaagaaaatgttcgaaagaagaacgcacgatgtgcc
aagaatggaagcagaggcgaagtttctgttaaaattgaagctaatgaaacatattctatc
cctgaccacaatgctggatccgacagtcctagcagtacccttcatgacttgaaccctgat
atatctgaaacttcatcatccttcaaaattgagcttgggaaaactgagtgtgagaagaaa
tctgcctggagaagatatcaagattttcagaagtggttgtggaaagaatgctataattca
tcagttttatgtgcaatgagatatgggataaagagatgcaaacctcagatggacatttgt
gatgcctgcctcaatccttattttgttgaagactcccattgcaattcctgccaccggact
tttccctcgaatactggatttaatttttctaaacatgcatttcagtgtcgtgataagtta
tccaaagatgattgttttttggaatattcgcttcccttgcgaacaagattacttaaggtc
ctgttggcttttatggaggtatctgttctatctgaagcatttggaacaagttggactgat
gatatgaggaagcactggggtgtaaagttgagcaaatcatcttctgttgaggaactttta
cagatattgaccctatttgagagagcaatatggcgagattttctgtcatcgaacttctct
acgacagatgaattgttgggattaagcagtatgtcagaaagctttgtgcaggcttcaact
gatcctgaatctgttgctgtgcttccatgggttccactaaccactgcagctttgtctctc
aggctttttgagattgattcatccatcagctacggaaagtttgaggaacatgagccttgt
gaggagaaagaagcaagagaatacataaagcttccatcgagatatgctcacacaaaatct
aatagggaggttgaaccagcagaatttgaccatattgaattcactaaagataaatctgtt
cataagaaaattgtacgaagtggcaataaacgtggacggggggctagtgaacaaggtcgg
ggtaaaaagctggctaaaagagtgtacaattccaaacgtgatggtggacgcaagaatgct
aaggtcactgagaatctaagtcacaaattaaaacatcaggcacgaagaacacaaggacaa
ggtgctgggcgaggtcggtctgtaaggaaaccgagagtgggaaagagagctgttgaagat
ttgttgctgggtcatacgacagccagtcatagctccaggattgatagggaaccgttgaga
aacttcgatgaggaatgggatggcgaaaaggcaagtcccatgactcctgtacacattggg
gttgttgacaatagtaacagtgctgaagaggtggaatctgatgacgacaatgctcaagct
gtggaatatgatcaaggaaactgggaagtaggttttaatggtgttccctccaacagatgg
agtagggatttggttggaatgagtgacgaagatgtggatgcttttgaagatgataatgac
aatgagaatggcatcgaagagaatgaattggaggattcagaggcagatgttatgagtgag
ggttcagatgggatagcaaatagggtagtaaatgttggagggtcagactcggctttgtct
gaagattcttctgattag
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