Cajanus cajan (pigeon pea): 109812194
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Entry
109812194 CDS
T04868
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109812194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109812194
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109812194
U7-dependent histone pre-mRNA processing factors
109812194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
109812194
NCBI-ProteinID:
XP_020231700
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MATSQSQHRCVFVGNIPYDATEEQLVEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDE
ETALSARRNLQGYEINGRQLRVDFAENDKGTDRNREQGRGGPGMTTNVDPQKQVGGPAVH
GEAVQHQPIGLHIAITAATVMTAALGGAQFGIQSNQNSLQNQSALAHDPLTLHLAKMSRS
QLTEIISELKGMATQNKELARQLLLSRPQLPKALFQAQIMLGMVTSQVLQMPNLRMVSDQ
ASQSLMSEGQLGQPSLIQTVSGLPPHGQNKLQSGLTPYAQEGKISTIPHNPLVPNQLTGH
PKLTVQPRIPLQQHPSNLVIPGTLSGQSSLMLPSVRPPGLGSLSVRPPIQPATSTALNQQ
MHASLLQHSVHVGNSTVGHNIQMVRPDASFQPGPSSSSANSQLLSKGDKSSKVLDDLNWA
KRTNTYSNMPLGVEKTNMVRDSSESITRPSKLMKLDEGRSTSLSAGISDMPVTDGSSHVL
GRSSLPVHAAPKAEGQYSEQQSSQLTPDVESVLLQQVLNLTPEQLSSLPPEQQQQVIQLQ
QALRRDQMQPS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcccagtcccagcatcgctgcgttttcgttgggaatataccgtatgatgcc
acagaagaacagcttgtcgaaatctgccaggaggttggtcctgtagtctcattcagatta
gttattgacagagaaactgggaagccaaaaggttatggattctgtgagtataaggatgaa
gagacagctttaagtgctcggcgaaatcttcagggttatgaaattaatgggcggcaatta
cgtgttgattttgccgaaaatgataaagggactgatagaaatagagaacagggtcgtggt
gggcctggaatgacaacaaatgttgaccctcagaaacaagttggtggcccagctgtccat
ggggaagcagttcagcatcagcctattggtcttcatattgccataacagctgcaactgtc
atgacagcagctctaggtggtgctcagtttggcatccagtcaaatcaaaatagtttgcag
aatcagtcagcattggcacatgatcctttaactctgcatctggccaaaatgtccaggagt
cagttgactgagattatatctgagctcaagggaatggctacacaaaacaaggaactggct
cgccagctgttgctttcaaggccacagttgcccaaggctctttttcaggctcagataatg
ctaggaatggtgacttctcaagtgttacaaatgccaaaccttaggatggtttcagatcaa
gcctcacagtctttaatgagtgaaggccagctgggtcagccatcattgattcaaactgtg
tccggccttcctcctcatgggcagaacaagttgcagtctggtttgacaccttatgctcaa
gaaggcaaaatcagcacaatacctcataatcctttggttcctaatcaattaactggacat
ccaaagcttacagtgcagcctcgaattccccttcaacaacatccaagcaaccttgtaatt
ccgggaacattgtcagggcagtctagtttaatgcttccttctgtgcgtcctccgggtttg
ggcagtttgtctgttaggcctccaattcaaccagcaacttcaactgctctgaaccagcaa
atgcatgcctctttgctacagcattctgtacatgttggaaactcaactgtaggacataat
attcaaatggtccgcccagatgccagctttcagcctggcccctccagttcatcagctaat
tctcagttattgagtaaaggtgataaatcttctaaagttcttgacgatttaaattgggct
aagagaactaatacatattcaaacatgccgttgggagtagagaaaacaaacatggttcgt
gattcttcagaatctattactcgcccgtcgaagctcatgaaattggatgagggaaggagc
acctctctttcagcaggaatttcagacatgcctgtcactgatggatcatctcatgtcctt
ggaagaagctcattgcctgtacatgcagctcctaaagcagaaggacaatattctgagcaa
caatcttctcagctcacacctgatgtggaatctgttctgctccaacaagtattgaatctg
acaccagagcaattgagttccttgccaccagagcagcaacagcaggtcattcagctccag
caggctcttcggcgagatcagatgcagccctcataa
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